Daucus carota (carrot): 108211990
Help
Entry
108211990 CDS
T05350
Name
(RefSeq) putative indole-3-acetic acid-amido synthetase GH3.9
KO
K14487
auxin responsive GH3 gene family
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
108211990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
108211990
NCBI-ProteinID:
XP_017239216
UniProt:
A0A166HEL1
LinkDB
All DBs
Position
1:complement(38625553..38628557)
Genome browser
AA seq
609 aa
AA seq
DB search
MDGKKLEYKGDKALKELDKLTRKADEVQENLLREILTRNGETEYLNKYLFGSKDISEFKK
SVPVITYKAIRPYIQRIANGEASSLITAHPITEMLCSSGTSAGEPKLMPSIEEDLDRRTF
LYNLIMPIMNQYITGLDEGKAMFLYFVKAEMSTPCGLPAPTVLTSYYKSKHFKFRSRDPY
TDFTSPDEAILCNDSNQSMYCQLLAGLVHRNQVLRLGAVFATAFLLAISFLKRKWMNICN
DIRDGQVDPTEVTDPKCRTAMSAILLRPDPRLADEIEAICSRDSWKGIICQLWPKAKYIE
AVVTGSMAQYIPSLQYYSNEKLPLVCPMYASSECYFGVNLKPLCSPDKVSFTLLPNMGYF
EFIPLGVNGTLVLDVDEDEEVPQSKLIGLVDVKLGCYYELVVTTFSGLNRYRIGDVLQVT
GFHNKAPQFRFICRRNVVLSIDNDKTNEEDLHKSITVAKKLLEPYNALLVEYTSYAETSS
VPGHYVIYWEIIQCSSALSSSLVKNKTMNEILTNQLDLNVLEDCCIAVEEELDYNYRRCR
ANDKSIGPLEIRVVKPGTFESLMDFFINQGGSINQYKTPRCIKSSAALKLLDSNVKARFF
SPRDPTWTP
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggatggaaagaagctggagtacaaaggtgacaaggcactcaaggagctcgacaagctg
acccgaaaagccgatgaggttcaagagaacctgctcagagagattttaacaagaaatggc
gagactgagtacttgaacaagtacttgtttggatcgaaagatatctcggagttcaagaaa
agcgtgcctgtgatcacgtataaggccatccgtccttacattcagaggattgccaatggt
gaagcctcttctctcattactgctcatcccatcactgagatgctgtgcagctcgggcacg
tctgctggagagccgaagctgatgccctctattgaagaagatcttgatcgcagaactttt
ctttataacctcatcatgcctatcatgaatcagtacattacaggccttgatgaaggcaag
gccatgttcctctactttgtcaaggccgagatgtccaccccttgtggcttaccggctccg
actgtcctcaccagctactacaaaagcaagcacttcaaattccggtcacgcgatccctac
actgatttcacaagccctgatgaagctattctctgcaatgacagcaaccaaagcatgtac
tgtcaattgttagctggcctagttcatcgcaaccaagtcctacgcctcggagctgttttt
gcaaccgcctttcttctagccatctcttttcttaaacgtaaatggatgaatatatgcaat
gacataagggatggtcaagtagaccctacagaggtcactgaccctaaatgcaggactgct
atgtcagcaatcctattaaggccagaccctcgtttggcagacgaaatcgaggccatatgt
agcagggattcatggaagggcataatttgtcagctttggcctaaagctaagtacattgaa
gctgttgtcacaggctctatggcacaatatataccatctctgcagtactatagtaatgag
aaattgccactggtttgtcccatgtacgcttcctcagagtgctattttggtgtgaatttg
aagcctttgtgttcaccggataaagtttcgtttactctgttgcctaacatgggctacttt
gaattcatacctctgggagtgaatgggacacttgttttagatgtggatgaagatgaagag
gtgccgcagagtaagctcatcggcttagtggatgttaaacttggttgttattatgaacta
gtggttaccacattttctggactaaatcgatatagaattggcgatgtgctgcaagtgact
ggcttccacaataaagcccctcaatttcgcttcatctgcagaagaaatgttgttctgagc
atagacaatgacaaaaccaacgaagaagaccttcacaagagcattactgtggccaaaaag
ctcctagaaccatacaatgctctgcttgtagagtacactagctatgcagagacgtcctct
gtccccggtcactatgttatctactgggaaataatacaatgctcatcagcattatcatca
tctctagtaaaaaataaaaccatgaatgagattttgactaaccagctcgatctgaacgtc
ctcgaagattgctgcattgcagttgaggaagaattggactacaactacaggcgttgtcgc
gccaatgataagtccattggaccgcttgagatccgtgtagtgaagccagggactttcgag
tcactgatggatttttttatcaaccaaggaggttccattaatcagtacaaaacacccaga
tgcatcaaatcctcggctgcactcaaactactcgattcgaatgtgaaggctcgcttcttt
agccccagggatcctacatggaccccttga
DBGET
integrated database retrieval system
