KEGG T05350: 108212092

Daucus carota (carrot): 108212092

Entry

108212092         CDS       T05350

Name

(RefSeq) putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1

K15711

SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]

Organism

dcr Daucus carota (carrot)

Brite

KEGG Orthology (KO) [BR:dcr00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dcr04121]
    108212092
   03400 DNA repair and recombination proteins [BR:dcr03400]
    108212092
Enzymes [BR:dcr01000]
2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     108212092
Ubiquitin system [BR:dcr04121]
Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    108212092
DNA repair and recombination proteins [BR:dcr03400]
Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    108212092

SSDB

Motif

Pfam:

SNF2-rel_dom Helicase_C zf-C3HC4_3 zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_UBOX zf-rbx1 zf-RING_5 Prok-RING_4 zf-ANAPC11 RING_XB3-XBAT31 DEAD zf-Nse ResIII HDA2-3 TRAF3_RING

Other DBs

NCBI-GeneID:

108212092

NCBI-ProteinID:

XP_017239313

LinkDB

Position

3:complement(4663782..4675805)

AA seq 651 aa
MEAICLRRTKEQGILGLPRKIMKICPVDLSAEERELYDQMEVEAKTAVQDYISSGTVRSH
YIAVLGIVLRLRQTCTHMDLCPKVHIATLPCSNKEELSNNPELLKKMAAILDGSEELECP
ICLSAPNNIVITRCAHIYCQSCILRTLKRDRPRCPLCRHDLSESDIFSAPTEQSNAEIAS
SGESSRITALLKLLSEARDQDPTAKSVVFSQFRKMLILLEEPLKTAGFNVLRLDGSMIAT
KRAQVIKDFGVPAPNGRPTVLLASLRASSTGVDLAAANRVYLLEPWWNPEVDDQAINRVH
LTGQTKDVTVVRIVARNSIEERILALQDQKRMAGPAVYKLNINDIRTLLSLLLEGPTVLL
GSPKASGTGVNLAATNTLHHLESRWNPAIEEQANDRVHRIGQMNEVTIMLYRSTYIFKVI
TSPARSFPKEVSMQLLWWRSIQKVDGMIEIVVFRYFIIGIVLGTSLKLGFIWSSGVTVQV
CKSCTVTLVVSSAGNASDLIDLVASRTTLVVSSTSVFSTCKEQLKKHTKPGKLSVYLYYE
QRTKDPMELVKYDLVLTTYSLLASELESGSPVFQVPWWRVILDEAHLIKHSTPTQASAVL
RLNARRRWLVTGTPLQNTTMDMYSFMSIFEIQSIYRQTLLEKDAAKASGHK

NT seq 1956 nt +upstreamnt +downstreamnt
atggaagccatctgcttgaggaggacgaaagagcagggcatactcggattgcctcgaaaa
atcatgaaaatatgtcctgtcgatctttctgctgaggagagagagctttacgatcagatg
gaagtggaggctaagactgccgttcaggattacatctcctcaggcacagtcagaagccac
tacatagccgtacttggaatagttcttcgactccgccagacatgtactcatatggacctc
tgccctaaagttcacattgcaactcttccgtgcagcaataaagaagagctgtccaacaac
cctgagctgctgaagaaaatggcggcaatactcgacggcagtgaagaattggagtgtccg
atctgcctttcggccccaaacaacattgtgatcacacggtgtgctcacatatactgccag
tcatgcatcctcaggaccctcaagcgtgacagaccccgctgccctctttgccggcatgat
ctctcggagtctgatattttctcagctccaacagaacaaagtaatgccgaaatagcctct
tccggagaatcatctaggataactgctctcctgaaacttctatcagaagcacgggatcag
gaccccacagcaaagtctgttgtattctcccagttcaggaagatgctgatcttacttgaa
gagcctctgaagactgctggcttcaatgtactgcgtttggatggatcgatgatcgcaaca
aagagggctcaagtgatcaaagattttggtgtgccagctcctaatggtcgtcccacggtt
ttgcttgccagtctaagggcatcaagtaccggagttgatctcgccgctgctaatagggtg
taccttctggagccctggtggaatccagaagttgatgaccaagcaataaacagagtacac
ctgacagggcaaacgaaagacgtgactgttgtacgaatcgttgcccgaaacagcatcgag
gagcggatattggctctccaggatcagaagaggatggctgggccggcggtgtacaaacta
aacatcaatgatatccggactctgctatccttgctccttgaaggtcccacagttttgctt
ggcagtccaaaggcatcaggtaccggagttaatcttgctgctactaatacgctgcaccac
ctcgagtcacggtggaatccagctattgaggaacaagcaaatgacagagtccatcggata
gggcaaatgaatgaggtgacaattatgttatacagatctacatacatattcaaagtcatc
acatcaccagcacggtcctttccaaaggaagtatcgatgcaattgctatggtggagatcc
attcaaaaagtagatgggatgattgaaattgttgtttttaggtattttatcatcgggatt
gttcttggtacatcattaaaattgggttttatttggtcttcaggtgttactgtgcaagta
tgcaagtcttgcacagtaacattggttgtgtcctctgctggaaatgcgtctgatttgatt
gatcttgtagcttccaggacaacattggttgtgtcctcgacttctgtgttttcgacgtgc
aaagagcaattgaaaaagcacacgaagccggggaagttaagtgtttacttgtattatgaa
cagaggactaaggacccaatggagcttgtaaagtatgatttggtactcaccacatactct
ttattggcttctgaactggaatcgggatcaccagtattccaagtaccttggtggagggtg
attttggatgaagcacatctgattaagcactccactcctacacaagcctctgctgtactt
aggttaaatgctagacggaggtggctggtcacaggaactcccctacagaacaccacaatg
gacatgtattctttcatgtcaatttttgaaatacaatccatttacagacaaacactcctg
gaaaaagacgctgctaaagccagtggacacaagtag

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