Daucus carota (carrot): 108212197
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Entry
108212197 CDS
T05350
Name
(RefSeq) exopolygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00040
Pentose and glucuronate interconversions
dcr01100
Metabolic pathways
Module
dcr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
108212197
Enzymes [BR:
dcr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
108212197
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
End_tail_spike
Motif
Other DBs
NCBI-GeneID:
108212197
NCBI-ProteinID:
XP_017239412
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Position
3:complement(9755306..9756955)
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AA seq
372 aa
AA seq
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MMLVLNTQVNCDGNTYSVTDYGAVSDGETDNTQSFMDTWKAACKAGGTMVIPAAKGNFFV
NRIELDGPCSGQVTFQLDGVIVAPSGNPYRGSWFTFYSIDGLTVQGSGMFDGNGPSAWAQ
CPKCSPSIGLYAITNSHIQDITSLNSKGVHFVMVGGDGVTFEHLNITAPSDSPNTDGISM
AKSSNIQVVDSYIGTGDDCVAIGQGSTDINISGVNCGPGHGISIGSIGKVEADKDVNGIH
VQNCTLTSTQNGVRIKSWAPSYPVTVSNVTYEDITINNASNPIVIDQTYCFVNKQCPGDS
QVQISDVKYIGVTGTSASQVAVNLQCSNSRTCQDIHLENIDLTLTEGGQASSNCANANVT
YSGTQNPPPCNQ
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgatgctagttttgaacactcaagttaactgtgatggtaatacttatagtgtgacagac
tatggtgctgtttcagatggagaaactgataacactcagtcattcatggatacatggaag
gcagcttgcaaagcaggtggcacgatggtgataccagcagcaaaaggaaactttttcgtg
aacaggatagagcttgatggaccatgcagcggtcaagtaacatttcaacttgatggagtt
attgtggcaccatcgggtaatccatatcgaggttcttggtttacattttactcaattgac
ggattgactgtccaaggttctggtatgtttgatggcaatggtccttcagcctgggcgcag
tgccccaaatgctctccatcaataggtctgtatgctattaccaattcgcatattcaagac
atcacgtcgcttaatagcaaaggtgtccacttcgttatggttggaggggacggggtcaca
ttcgaacatctcaacataacagcgccaagtgatagtccgaacactgatggaataagtatg
gcaaagtctagtaatatccaagtcgttgattcctacatcggcactggtgacgactgcgtg
gctattggacaagggagcacagatattaatatcagcggagtcaattgtggtccgggacat
ggtattagcatcggaagcattggcaaggttgaggcagataaagacgttaatggaattcat
gtacaaaactgtactttaacctctactcagaatggtgtgaggataaaatcctgggctcct
tcatatcctgtcactgtttcgaatgttacctacgaagatatcacaattaataatgcaagt
aatccaattgtcattgatcagacatactgttttgttaacaagcaatgtccgggtgactcg
caagttcaaatcagcgacgtgaagtatatcggcgttacaggaacatcagcatctcaagtt
gctgtaaatctacaatgcagcaacagtaggacatgccaagacatacatctggagaacatc
gatcttacgttgacagaaggaggacaggcatcttctaattgtgccaatgctaatgtgacg
tactcagggacacaaaatcctcctccttgtaatcaataa
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