Daucus carota (carrot): 108212992
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Entry
108212992 CDS
T05350
Name
(RefSeq) RING-H2 finger protein ATL78
KO
K19040
E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:
2.3.2.27
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcr04121
]
108212992
Enzymes [BR:
dcr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108212992
Ubiquitin system [BR:
dcr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
108212992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
FANCL_C
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
108212992
NCBI-ProteinID:
XP_017240200
UniProt:
A0A166GBC1
A0AAF0W5X9
LinkDB
All DBs
Position
1:complement(21230307..21231312)
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AA seq
226 aa
AA seq
DB search
MSISALNTATVVFQEVQSNFYSRKLLLQTPLYQQQSAATPPVSGNAHVASEPYPGDNNFD
ANVVMVLSVLLCALICSLGLNSIVRCALRCSRLVASESSESSSARLANTGIKKKALKTFP
VVNYTADLKLPGLDAECVICLSEFATGERVKVLPKCNHGFHIRCIDRWLNSHSSCPTCRQ
CLIQTCQKIVGCSMPSAPQPIPPHQENVTIRIAPLEPEGVVRSFQT
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgtctatttctgctttaaacactgcaacagttgtctttcaagaagttcaaagcaacttt
tactcgagaaagttgctattacaaacccctctttatcaacaacagtctgcagcaactcct
ccagtgagtggcaacgcacacgtcgcatcagaaccttatccaggggataataatttcgat
gcaaatgttgtgatggtactctcagtcctcttgtgtgctttaatttgttcactaggatta
aattctatagttaggtgtgccttgaggtgctcaagattagtagcctctgaatcaagtgaa
agctcttcagctcgtttagcaaatacagggatcaagaaaaaggctctcaaaacttttcca
gtagtaaattacacagctgacctgaagctacctggattagatgctgagtgcgtaatatgc
ctttcagagtttgctactggcgagcgtgtgaaagttttgcccaagtgcaaccatggtttt
catatccgatgcatcgacaggtggctcaattcccattcatcatgccctacttgtagacaa
tgcctgattcagacatgtcagaaaatagtcggctgcagcatgcctagcgcaccacaacca
atccccccgcaccaagaaaacgttactatcagaatcgcacctttggaacctgagggtgta
gtgcgtagtttccaaacctaa
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