Daucus carota (carrot): 108213038
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Entry
108213038 CDS
T05350
Name
(RefSeq) vacuolar protein sorting-associated protein 60.1
KO
K12198
charged multivesicular body protein 5
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108213038
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108213038
Membrane trafficking [BR:
dcr04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
108213038
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Snf7
DUF1319
Prefoldin
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
108213038
NCBI-ProteinID:
XP_017240259
UniProt:
A0AAF1AVZ9
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All DBs
Position
3:57088150..57092782
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AA seq
309 aa
AA seq
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MLSPNGMYVNKRVVYFNTRSKSDFLSKSLPRSFCFSFRVYFASQISASYTRVLQSQFNFQ
NPNSPNYYQSNKMKRVFGVKKDKEPPPSLNDASDRINKRGESVDEKIKRLDAELARYKEQ
IKKTRPGPAQEAVKSRAMRVLKQKRMYEGQRDMLYNQTFNLDQVAFASEGIKDAQQTMTA
LKSANKELKGMMKSVKIQDIDNLQDEMMDLMDVSNEIQESLGRSYSVPDDIDEEELMGEL
DYLEADMGLETESDSVPSYLQPDKESDYDAELNLPSAPTGQTAMHAGRANGQEEDELGLP
AVPRASLRG
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgctctcccctaacggaatgtatgtaaataaacgagtagtttactttaatactcgcagc
aaatctgactttttatctaaatctttgccacgaagcttctgcttctccttccgtgtttat
tttgcatcccaaatatccgcatcttatactcgtgtattacaatcccaattcaattttcaa
aaccctaattccccaaattactatcaatcgaacaagatgaagagagtctttggtgttaag
aaagataaagagccccctccttccctcaacgacgcctccgatcggataaataaaagaggt
gaatctgttgatgagaagattaaaaggctcgatgctgaacttgctcgatacaaagaacag
attaaaaaaactagacctggtccagcacaagaagctgtcaaatctagagcaatgagagta
ctaaagcaaaagagaatgtacgagggacagcgagatatgctttacaatcaaaccttcaat
ctagaccaagttgcatttgcttctgaaggaattaaagatgctcaacaaactatgaccgct
ctgaagtcagcaaacaaagaattaaaaggaatgatgaagagtgtgaagattcaagacata
gataacttgcaagatgagatgatggacctgatggatgtgagcaatgaaattcaagagtct
cttggtagaagctacagtgtgcctgacgacattgatgaggaagaactcatgggagagctt
gattacttggaagcagacatggggttggagactgaaagtgactcggtaccttcatatctt
cagcctgataaggaatcagactacgatgcagaacttaacttgccatcagcacctactgga
cagacagcaatgcatgctgggagagctaatgggcaggaagaagatgagcttggtttacca
gcagttcctcgtgcatctcttcgtggttag
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