KEGG   Daucus carota (carrot): 108213061
Entry
108213061         CDS       T05350                                 
Name
(RefSeq) DNA-directed RNA polymerases II and IV subunit 5A
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
dcr  Daucus carota (carrot)
Pathway
dcr03020  RNA polymerase
dcr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    108213061
  09124 Replication and repair
   03420 Nucleotide excision repair
    108213061
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dcr03021]
    108213061
   03400 DNA repair and recombination proteins [BR:dcr03400]
    108213061
Transcription machinery [BR:dcr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     108213061
  RNA polymerase III system
   RNA polymerase III
     108213061
  RNA polymerase I system
   RNA polymerase I
     108213061
DNA repair and recombination proteins [BR:dcr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      108213061
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N NA-iREase1
Other DBs
NCBI-GeneID: 108213061
NCBI-ProteinID: XP_017240287
UniProt: A0A166C5A0
LinkDB
Position
3:complement(57919922..57923105)
AA seq 206 aa
MAMTEEEIARLFRIRKTVLQMLDDRGYLVGDAEKELTKYQFLQRYGDNMKREDLVISKTK
KNDPSDQIYVFYPEEPKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCIAEISSK
FNLEVFQEAELLVNIKEHVLVPEHQVLTKDEKKTLLERYTVKETQLPRIQLSDPVARYYG
LQRGQVVKIIRPSETAGRYVTYRYVV
NT seq 621 nt   +upstreamnt  +downstreamnt
atggcaatgacagaagaagagatagcaaggttgtttagaataaggaagacagtgttgcag
atgctggatgacagaggttacttggtgggtgatgctgaaaaagagttgactaagtaccag
tttcttcaaagatatggtgataatatgaaaagggaagatcttgttattagcaagaccaag
aaaaatgacccctctgatcagatttatgtgttctatcccgaggagccaaaggttggtgta
aagacaatgaagacatatactaatcgtatgaaatcagaaaatgtttttcgagctatcttg
gttgtccagcaaaatttgactccctttgcccggacatgcatagctgaaatatcttcaaag
ttcaacttagaggtcttccaggaggcagagttgttagttaatattaaagagcatgttcta
gttcctgaacaccaggtgctcacaaaagacgaaaaaaagacattgctggagagatatact
gtaaaggaaacacagctaccccgtattcagttgagcgatccagtagccaggtactacggt
ttacaacgtggtcaagttgtgaaaatcatccggcctagtgagactgcagggcgttatgtt
acctaccgttatgttgtctaa

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