Daucus carota (carrot): 108213282
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Entry
108213282 CDS
T05350
Name
(RefSeq) E3 ubiquitin-protein ligase ATL41
KO
K19038
E3 ubiquitin-protein ligase ATL41 [EC:
2.3.2.27
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcr04121
]
108213282
Enzymes [BR:
dcr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108213282
Ubiquitin system [BR:
dcr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
108213282
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
Prok-RING_1
zf-C3HC4_4
PHD
Prok-RING_4
zf-RING_4
SLX1_C
zf-RING-like
RINGv
FANCL_C
zf-HC5HC2H_2
Baculo_RING
EHMT1-2_CRR
Zn_ribbon_HMPTM
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
108213282
NCBI-ProteinID:
XP_017240550
UniProt:
A0A162AH60
LinkDB
All DBs
Position
3:complement(10610527..10611150)
Genome browser
AA seq
207 aa
AA seq
DB search
MDIDDDDHRYNVSGKIMVTAIISLSFVVLLVTLLHIYVRCVLRRQARQRASLWQIGLFAT
APEPPKAGLDETIIGSLPSFVFRHDHKSRTIECAVCLSNLEDGELIRILPNCDHNFHVAC
IDTWLSTNSTCPVCRSAVEPPQIIEQGNEPETEEPHPTAPPLDHEIAEGTAEASGKVIGS
SSRLGSFRKMLSRDRSSQRIHDDLEKQ
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atggatatcgacgacgacgatcatcgctacaatgtgagcggcaaaatcatggtcacggcg
ataatatctctgtcattcgttgtactacttgtcacactccttcacatttatgtaagatgt
gttcttcggcgccaagctcgccagcgcgcttctctctggcaaataggcctcttcgcaacg
gctcccgagcccccgaaagccggcctagacgaaacaatcatcggatcactgccaagtttt
gttttcagacatgatcacaagtcaaggactatagagtgcgcagtctgtctaagtaactta
gaggatggcgaattgattagaattttaccgaattgtgatcacaatttccatgtagcttgt
attgatacttggttaagtacaaattccacttgtcctgtttgtcgtagcgcggtagagcca
ccgcagattattgaacaaggcaatgagcctgaaacagaggagcctcatccgacagctccg
cctctggatcatgaaatcgcggagggaacagctgaggcttcggggaaggttattggatca
tcgtcaagactaggttcgtttaggaaaatgttgagccgggatcgttcatcacagcgaatt
catgatgatctggagaagcagtaa
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