Daucus carota (carrot): 108213546
Help
Entry
108213546 CDS
T05350
Name
(RefSeq) cyclic nucleotide-gated ion channel 2
KO
K05391
cyclic nucleotide gated channel, plant
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
108213546
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dcr04040
]
108213546
Ion channels [BR:
dcr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
108213546
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
108213546
NCBI-ProteinID:
XP_017240840
UniProt:
A0A161XZQ6
LinkDB
All DBs
Position
3:46811835..46816297
Genome browser
AA seq
686 aa
AA seq
DB search
MQRCIPVPRLTGSKNKKIQDIGMVEAPECNQIGTPDFHPTHSNPSHHSTWKSLSSSPLIP
TDHPNENLSNRNKRTERRVFNPRRPNIKRLNQCLVLSRVISLAIDPLFLIALSITGGAKP
CIYLDGTMLVFATVLRTCLDLIHLLHIWLKFRTAYLSKESLVIGSGMLVWDTRSIIRHYV
RSLKGFWFDLFVVIPAPQILYWLLLPKLLREEKPEDVMILAQFIFLFQFLPKLYHCFHLM
HGVSKVAGYLFGTAWWGFILNLIVYFLASHVSGGFWYILSIQRVAECLRQQCYKSNQCDA
LALTCPRKICYSSFTHSCMDNSNMEADFSTCMDQNGDFPYGLYAFVLPLIIKNSNIVKIL
YASLWGLEAFSTMGNNLTPWTQPYEVIFTITMVLAGLALFTLLIGNIQVFLHSVTSRRRK
MQIKYRDMEWWMRRRRIPYHLRRRVLDFEHQRWEIMRGQNEMEFTKDFPDGLRRDIKRFL
CLDLVRKVPLFDHLDDLILDHICDRVKPMIYSKDEKIFKEGEPVERMMFIVSGCVRRIQN
ITQDMVTTSLIEPGGFFGDELISWCLRRPFIERFPASSATFTCVEAVEAYGLNADHLKYI
TKHFRYTFLRDELKYKTRYYSSNWRSWAAVNIQFAWRRHLRRVRDDHDIRGTGSGSGSDG
ATSSSDQRLRHYAAMFMSLRPHDYLE
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggtgcattccggtgccaagactaacaggttcgaaaaataaaaaaatccaggac
attggtatggtggaagcccctgaatgtaatcagattggtacccctgattttcatcccacc
cattccaacccaagtcaccactccacatggaaatctctatccagttcacctcttatccca
actgaccatccaaacgaaaacttaagcaatcgaaataaaagaactgagcggcgtgtcttc
aacccacgaagaccaaacatcaaacgattgaaccagtgcctcgtgttgtcacgtgtaatc
tccctggctattgatcctctcttcctcatcgctctctccatcactggtggtgctaagcca
tgtatttatctcgacgggaccatgttagtgtttgctaccgtgctgcgcacatgcttagat
ttaatccacctactgcatatctggttgaagtttcgaacggcttatttgtcaaaggagtct
ttagttatcggaagcggcatgcttgtgtgggatacacggtccatcattagacactatgtc
cggtcgctcaaaggcttctggttcgacctgtttgttgtaattccggccccgcagatctta
tattggttattattaccaaaattactgagagaagaaaagccagaagatgtaatgatattg
gctcaattcatcttcttatttcaattcctcccaaaactttatcactgcttccacctaatg
catggagtgagtaaggtggctggctatcttttcggcaccgcttggtggggttttatccta
aatctcatcgtttacttccttgcttcacatgtgtctgggggattttggtatatattatct
atacaacgtgtagcagagtgcctaagacaacagtgctataagagcaaccaatgcgatgca
cttgctttaacatgtccaagaaagatttgttatagcagttttactcattcttgcatggac
aactccaacatggaggcagatttctcaacttgcatggaccaaaatggagattttccctat
ggtctttatgcctttgttttgcctctcattattaagaactcgaacattgtcaaaattctg
tatgctagtctatggggtctcgaggctttcagcactatgggcaataatttgaccccctgg
acccagccgtatgaagttatttttaccataaccatggtgttagcaggcttagcactcttc
actttgctaattggtaatatccaggtatttcttcattccgtaacgtctagaaggagaaaa
atgcagataaaatatagagacatggaatggtggatgagacggagaagaataccatatcac
ttgaggcgaagagttttggattttgaacaccagagatgggaaattatgagaggccaaaat
gagatggaatttaccaaagattttcctgatggactaagaagagatattaagcgttttctc
tgcttggacttggtgcgaaaggtaccattatttgaccacttggatgaccttattctcgat
catatatgtgatcgggttaaacctatgatttattcaaaggatgaaaagatttttaaagaa
ggtgaaccagtagaacgtatgatgttcattgtaagtggttgcgttcggagaatccaaaac
atcacacaagacatggtaacaactagtttgattgaacctggtggcttttttggagatgaa
ctcatatcatggtgccttcgtcgtccatttatagagcgttttccagcttcatcagcgact
tttacttgtgtggaggcagttgaggcatatggcctaaatgctgatcatcttaaatatata
acaaaacatttccgttacacatttttaagggacgaacttaagtacaaaacaaggtattac
tcttctaattggaggtcatgggctgctgtcaacatacaatttgcatggaggcgtcatttg
aggagggttagagatgatcatgatattcgcgggacaggtagtggcagtggtagtgatggt
gccacaagtagcagtgaccagagacttcgacactatgcagcgatgttcatgtcgctgagg
cctcatgactatcttgagtag
DBGET
integrated database retrieval system
