Daucus carota (carrot): 108213709
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Entry
108213709 CDS
T05350
Name
(RefSeq) vacuolar protein sorting-associated protein 2 homolog 2
KO
K12191
charged multivesicular body protein 2A
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108213709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108213709
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dcr04147
]
108213709
Membrane trafficking [BR:
dcr04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
108213709
Exosome [BR:
dcr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108213709
Exosomal proteins of other body fluids (saliva and urine)
108213709
Exosomal proteins of colorectal cancer cells
108213709
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Snf7
YlqD
DUF4400
hDGE_amylase
FliG_N
MerR-DNA-bind
Cep57_MT_bd
Motif
Other DBs
NCBI-GeneID:
108213709
NCBI-ProteinID:
XP_017240997
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All DBs
Position
1:47376982..47380702
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AA seq
216 aa
AA seq
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MNLFRKKTSPKDALRTSKREMSVATRGIEREIASLELEERKLVAEIKRTAKTGNEAATKI
LARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNKQMEPAK
QAKVVREFQKQSAQMDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDIASQLSS
APKGRIASKKVDNAVPSAQSNDVEDLEKRLASLRRI
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcttcaggaaaaaaacatctcccaaagatgcattgaggactagcaaaagggag
atgtctgttgctactagaggcattgagcgtgagattgcatctttagaattagaggagagg
aaacttgtggcggagataaagagaacagcaaaaactgggaatgaggctgccaccaagatc
ttggctcgtcagcttgtacgtcttaggcagcaaataacaaatctgcaggggagtcgtgca
cagataagaggagtggctacacatacacaggctttgtacgccagcacttcaatttcgaca
ggaatgaaaggtgcaacaaaagcaatggtggcaatgaacaagcaaatggaacctgccaaa
caagctaaggtggttagggagttccagaagcagtcagctcagatggacatgacgattgaa
atgatgtcagagtccattgatgaaactcttgacaaggacgaggccgaagaggaaacagag
gagcttactaaccaggtgcttgatgagattggtgtggacattgcatcacagttgtcttcg
gccccaaaaggacgaattgcttcgaagaaggttgacaatgctgtacctagcgctcagtct
aatgatgttgaggatctcgagaagaggttggcttcacttcgacgcatatga
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