KEGG   Daucus carota (carrot): 108213709
Entry
108213709         CDS       T05350                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 2 homolog 2
  KO
K12191  charged multivesicular body protein 2A
Organism
dcr  Daucus carota (carrot)
Pathway
dcr04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    108213709
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dcr04131]
    108213709
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dcr04147]
    108213709
Membrane trafficking [BR:dcr04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    108213709
Exosome [BR:dcr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   108213709
  Exosomal proteins of other body fluids (saliva and urine)
   108213709
  Exosomal proteins of colorectal cancer cells
   108213709
SSDB
Motif
Pfam: Snf7 YlqD DUF4400 hDGE_amylase FliG_N MerR-DNA-bind Cep57_MT_bd
Other DBs
NCBI-GeneID: 108213709
NCBI-ProteinID: XP_017240997
LinkDB
Position
1:47376982..47380702
AA seq 216 aa
MNLFRKKTSPKDALRTSKREMSVATRGIEREIASLELEERKLVAEIKRTAKTGNEAATKI
LARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNKQMEPAK
QAKVVREFQKQSAQMDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDIASQLSS
APKGRIASKKVDNAVPSAQSNDVEDLEKRLASLRRI
NT seq 651 nt   +upstreamnt  +downstreamnt
atgaatctcttcaggaaaaaaacatctcccaaagatgcattgaggactagcaaaagggag
atgtctgttgctactagaggcattgagcgtgagattgcatctttagaattagaggagagg
aaacttgtggcggagataaagagaacagcaaaaactgggaatgaggctgccaccaagatc
ttggctcgtcagcttgtacgtcttaggcagcaaataacaaatctgcaggggagtcgtgca
cagataagaggagtggctacacatacacaggctttgtacgccagcacttcaatttcgaca
ggaatgaaaggtgcaacaaaagcaatggtggcaatgaacaagcaaatggaacctgccaaa
caagctaaggtggttagggagttccagaagcagtcagctcagatggacatgacgattgaa
atgatgtcagagtccattgatgaaactcttgacaaggacgaggccgaagaggaaacagag
gagcttactaaccaggtgcttgatgagattggtgtggacattgcatcacagttgtcttcg
gccccaaaaggacgaattgcttcgaagaaggttgacaatgctgtacctagcgctcagtct
aatgatgttgaggatctcgagaagaggttggcttcacttcgacgcatatga

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