KEGG   Daucus carota (carrot): 108213785
Entry
108213785         CDS       T05350                                 
Name
(RefSeq) transcriptional repressor tup11
  KO
K20241  WD repeat-containing protein 44
Organism
dcr  Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dcr04131]
    108213785
Membrane trafficking [BR:dcr04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    108213785
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_WDR75_1st EIF3I ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_EML Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_DCAF12 WD40_MABP1-WDR62_1st Beta-prop_HPS5 BBS2_Mid NBCH_WD40 WD40_RFWD3 Beta-prop_EIPR1 WD40_like Beta-prop_WDR19_1st Ge1_WD40 VPS11_N HYR
Other DBs
NCBI-GeneID: 108213785
NCBI-ProteinID: XP_017241074
UniProt: A0AAF0W309
LinkDB
Position
1:complement(19832956..19842012)
AA seq 653 aa
MPSFDATEEVYFESVDYLSSEESVVEREDLGYLELGYEVWMSEPQSVNERRGNFIKEMGL
RELSSSPESGSDRMRDCGGAVSSSCALSFRSVEDIMACIERDWSSGGNCMVDELDQSQMD
SCLASDRENVEVSVSAEQVGHRAPENHLCENEDFPVDQKRARSLWKSFKSKFKRNLGSDV
KSVTERPKSSRLKVQKNNKKCREMSAVYVGQKFHAHEGLIWTMKFSPDGQYLASGGEDGV
VRIWRITTTCTSCKKLGIECDDQERYGKSGSGLKKLNHTSVFIPDTNFQMEELPVQELHG
HTSDILDLAWSNSNHLLSSSKDKTVRLWKLGHDKCLGVFNHKNYVTCTQFNPVDENYFIS
GSIDGKVRIWGVHEKRVVDWADVRDVITAICYHPNGKHFAVGSLSGTCRFYDASGNDLLV
AAEFQVQGKKRCSGNRITGIQFTEEDSQKVMITSEDSKIRVFDGIDIIHKYRGLSKSGSQ
MSASFTSSGKHIISVGEDSHIYVWNYDDEGVTTKHPRSVRSCEHFFCEGVSVAVPWSNRE
INQKASDCHEYSMPKQDIQDSTIGIRDSERFSLANWFFMDGSFRGTATWPEERLPLWELP
ALKQNHELFDNDQPYQQPNHHNISHDTWGLVIVTAGSDGMIRTFHNYGMPVKN
NT seq 1962 nt   +upstreamnt  +downstreamnt
atgccgagttttgatgcgacagaagaggtttattttgagagtgtagattatttgtcttct
gaagagtccgttgtcgagagagaagatttgggttatctagaattagggtatgaggtttgg
atgtctgagcctcaaagtgtgaatgagcgacgcggaaatttcattaaggagatgggattg
cgtgaattgtctagttcacctgaatcgggatcagataggatgagagactgtggtggggct
gtttcaagttcttgtgcattgtcatttcgtagtgtagaagatatcatggcttgtattgag
agggactggagcagtggaggcaattgtatggttgatgaattagaccaatctcaaatggat
tcttgccttgcttcagacagggaaaatgttgaagtttctgtctcggctgaacaagttgga
cacagagcacctgaaaatcacttatgtgaaaatgaggattttcctgtagaccagaaaaga
gcaagaagtttatggaagagcttcaagagcaagtttaaaagaaatcttgggtcagatgtg
aaatctgttacagaaaggccaaaatcaagtaggttaaaggtgcagaaaaataataagaag
tgccgggagatgagtgcggtgtatgttggacaaaaattccatgcacatgaaggccttatc
tggacaatgaaatttagtccagatggccagtatctggctagtggcggtgaagatggggta
gttcgcatttggcgtattacaacgacctgcacctcttgtaaaaaactgggtattgaatgt
gatgaccaggagaggtatgggaaatctggttctggattaaagaagttgaatcatacttca
gtctttattccagatacaaatttccagatggaggaattgccagtgcaagagttacatggt
cataccagcgatatcttggatctggcttggtccaattctaaccatcttctttcctcatcg
aaggataaaactgttcgattgtggaaactgggacatgataaatgtcttggggtttttaat
cacaagaactatgtgacatgcactcaattcaaccctgttgatgagaattactttattagt
ggatcaattgatgggaaagttcgaatttggggagtccatgagaagcgagtagttgattgg
gctgatgtacgagatgtaattactgccatatgctaccatccaaatggaaagcattttgca
gttggttccctctctggcacttgccgtttctatgatgcatcaggcaatgatctcctagtc
gccgctgaatttcaagtgcaaggtaaaaagagatgctcgggcaatagaatcaccggcatt
cagttcacagaggaagactcccaaaaggttatgataacatctgaggactccaaaatccgc
gtttttgatgggattgacatcatccataaatacagaggcctttcaaaatctggaagtcag
atgtcggcttcatttacatcatccgggaaacacataatatcagttggggaggactcccat
atttatgtctggaactatgatgatgagggtgtcactacaaaacaccccagatctgtacgt
tcttgcgagcatttcttctgcgaaggcgtgtctgttgcagttccatggtccaacagagaa
atcaatcaaaaggctagtgattgtcatgaatattccatgccaaaacaggatatccaagat
tctactataggcattcgagattcagaacgattctcattagcaaactggttcttcatggat
ggatcatttaggggtactgccacatggcccgaggaacgactccctctgtgggaattacca
gcactgaagcaaaatcatgagctattcgacaatgatcagccatatcagcagccaaaccat
cacaatattagccacgatacatggggcttagtgattgtaacagctggttcggatggcatg
atcagaacattccacaattatggaatgcctgtgaaaaattag

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