Daucus carota (carrot): 108213835
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Entry
108213835 CDS
T05350
Name
(RefSeq) probable E3 ubiquitin-protein ligase XERICO
KO
K16285
RING/U-box domain-containing protein [EC:
2.3.2.27
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcr04121
]
108213835
Enzymes [BR:
dcr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108213835
Ubiquitin system [BR:
dcr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108213835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-C3HC4_2
zf-RING_5
zf-RING_16
zf-C3HC4_3
zf-ANAPC11
TackOD1
FANCL_C
PHD
Prok-RING_4
zf_RING_Vps8
zf-RING-like
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
108213835
NCBI-ProteinID:
XP_017241116
UniProt:
A0A166I8K1
LinkDB
All DBs
Position
1:complement(45024944..45026506)
Genome browser
AA seq
153 aa
AA seq
DB search
MGLSQYPGPADAEMMCMILVNTAKYISMMKEMVRSVLKTIGIDIVSWEEYNTDIPSDSLE
CYESSSETSIEEFRGRIPAMRYDSVFSKQLEHDCSVCLTNFRPKAIINHLSCGHVFHQVC
VEKWMKYRKLTCPNCRTNMIPQDEDEEEDTCPM
NT seq
462 nt
NT seq
+upstream
nt +downstream
nt
atgggactctcacaataccccggtccagctgatgcagaaatgatgtgcatgattttggtc
aataccgctaaatacatctctatgatgaaggaaatggtccgctctgtacttaagactata
ggcattgatattgtatcatgggaagaatacaacactgatatcccctcggactcgttagaa
tgttacgaaagctcctcagaaacctctatagaagagtttcgtggtaggatacctgcaatg
cgatatgattccgtgttttctaagcaacttgagcatgattgctctgtttgcttgacaaat
tttagaccaaaggcaataataaaccacttgtcatgtgggcatgtttttcatcaagtttgt
gtggagaagtggatgaaatatcggaagctcacctgccccaactgcaggacaaacatgatc
ccccaagacgaagacgaagaagaagatacttgtccaatgtga
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