Daucus carota (carrot): 108214132
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Entry
108214132 CDS
T05350
Name
(RefSeq) cytosolic endo-beta-N-acetylglucosaminidase 1
KO
K01227
mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase [EC:
3.2.1.96
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
108214132
Enzymes [BR:
dcr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.96 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
108214132
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_85
TIM-barrel_EndoS
Motif
Other DBs
NCBI-GeneID:
108214132
NCBI-ProteinID:
XP_017241425
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All DBs
Position
3:complement(55474936..55489135)
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AA seq
716 aa
AA seq
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MQIPFRAYINRQTLITLKTIYTIIHTSIASIFFPTKMSTPTPTPPPFDPSRPSSPISYPI
KTLEELESRSYFDSFHYPFNKSWGCTQGVRSNAAEKSLPMRPRLLVCHDMAGGYGDDKWV
QGGDNPDAYAIWHWYLMDVFVYFSHSLVTLPPPCWVNAAHLHGVKVLGTFITEWDEGKAI
TRKLLETKESAHMYAERLTELAVSLGFDGWLINMEVEVDIEQIPNLKEFVSHLTYAMHSS
KDGSLVIWYDSVTVFGKLEWQDHLNDSNKPFFDACDGIFVNYTWKANYPKLSADVAGSRQ
FDVYMGIDVFGRGTFGGGQWTTNVALDVIKKDNVSAAIFAPGWVLETNQPPDFQTAQNRW
WGLVENSWGVSQKYPKSLPFYSNFDQGHGYHIFMDGRKISTKPWNNISCQSFQPLLDCLE
DQRPNAIQVSIDFNEASYIGGGNITLKGSLDGDTYFTTRIFQGELLFGNLPVLFTFSVKS
DVSSMVGLSLKFSSQALEKTSILLASRGDSVLNTKQFSSKFNRVIMPHQVKRLDATPGWV
IQESRLAMEGYTLTGIHIICYRSKHISVNHEIVTQSPSIYNAVLGHIDIRTSATNSDFPP
DASWLVEGQFIKWTSGSEASKTVSVKIIWKLKDGTASWFPSYNIYVEKQGIVRNSNALLE
ERLEYLGLARVEAFYISDLMVPSGISRLNFIIQVCSLDGTLQKLDCSPSFQLNVEG
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcccatttcgcgcctatataaaccgccaaaccctcatcaccctcaaaaccatc
tacaccataatacacacaagcattgcatctatcttcttccccaccaaaatgagcactccc
accccaactccacccccatttgatccctcccgaccctcttcaccaatctcttatccaatc
aaaaccctcgaagaactcgagtccaggtcttattttgactcgtttcactacccttttaac
aaatcttggggttgcacacaaggtgttcgatcaaatgccgcagagaagagtttgccgatg
aggccgagattgttggtctgtcatgatatggctggtgggtatggtgatgataagtgggtg
caaggtggggataacccggatgcttatgccatttggcattggtatttgatggatgtgttt
gtgtatttttcgcatagtttggttactttgccgcctccttgttgggttaatgctgcacac
ttgcatggtgttaaggtactgggtacttttattaccgagtgggatgaagggaaagctatt
actcgtaaactgcttgagacaaaggagtctgctcacatgtatgcggagcgcttgactgag
cttgctgtttcccttggctttgatggatggttgatcaacatggaagtagaagtagacatt
gaacaaattcctaatttaaaggaatttgttagccacttaacttatgctatgcactcttcg
aaggatgggtctttagtcatatggtatgatagtgttactgtttttggaaaacttgagtgg
caggatcatctaaatgacagcaacaagcccttttttgatgcatgtgatggcatttttgtt
aactatacatggaaggccaattatcctaagctctcagctgatgttgctggtagcagacaa
tttgatgtgtacatgggtattgatgtatttggaaggggaacctttggtggtggacagtgg
acaacaaatgttgcacttgatgtaataaagaaagataatgtgtcagctgctatctttgca
cctggatgggtacttgagacaaatcagccgcctgattttcagacggctcaaaaccgatgg
tggggacttgttgagaattcatggggagtatcacaaaagtaccctaaatcacttccattt
tattcgaactttgatcagggtcatggttaccacattttcatggacggaaggaaaatatca
actaaaccttggaacaacatctcttgccaaagctttcagcctcttctagattgtcttgaa
gatcagagaccaaatgcaattcaagtttctatagattttaatgaagcgtcttatattgga
ggaggaaacatcacgctaaaaggatctcttgatggcgatacttattttacaaccaggata
tttcaaggagaactgctttttgggaacttgccggtcctttttactttttctgtgaaatca
gatgtgagctctatggtaggcctttctctcaagttttcttctcaggcgttggagaagaca
tcaatactactcgcttctcggggtgattccgtgctaaacacaaagcagttctctagcaag
tttaatagagtaattatgccacatcaagtgaaacgactagatgcaactccaggatgggtg
atacaagagagccgtcttgcaatggagggctacacattaacagggattcatatcatttgt
tatagatcaaaacatatctcagttaaccatgaaatagtgactcaaagtccatctatatat
aatgcagtgctggggcatatcgatattagaacttctgcaacaaactcagatttcccacct
gatgcatcatggttagttgagggtcagttcataaaatggacttcaggttccgaggcttcg
aagaccgtcagtgttaagatcatttggaaactgaaagacggaacagcttcttggttccct
agctacaatatctatgttgagaaacaaggaatagtcagaaattcaaatgcactgcttgaa
gaaaggctagaatatcttggactggcacgagtggaagccttttatatatctgatctcatg
gttccttctggtatctctagactaaatttcatcattcaagtatgcagtcttgatggcact
ttgcagaagttagattgttcaccgtctttccagttaaacgtagaaggttag
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