Daucus carota (carrot): 108214143
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Entry
108214143 CDS
T05350
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108214143
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcr04121
]
108214143
Enzymes [BR:
dcr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108214143
Ubiquitin system [BR:
dcr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
108214143
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
DUF2067
FAIM1
Spectrin_7
zf-Di19
Motif
Other DBs
NCBI-GeneID:
108214143
NCBI-ProteinID:
XP_017241443
UniProt:
A0A162AFK6
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Position
3:complement(2739740..2741466)
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AA seq
328 aa
AA seq
DB search
MAEGISFRGMDDTRTTELTEIFREKEEGLRHQVLGIDKEVRELGMKLDKMDVKFEELKEL
IMSFRNQGSTVVKLETSATSEDTGLKSNCMEEVQNRCPTCRRELRDIRCLALENAAGSLE
LPCEYYTLGCLEIFPYDSSKIKHERVCSFRPFSCPYAGSECTVIGDIPLLVSHLRDDHKV
DMHTGCTFNHRYLKTNPREVENATWMLTVFHCFGQYFCLHFEDFQLGKSPVYIAFLRFMG
EEADAPNYSYSLEVGENEMKIKWEGTPRSIRDSHQKVRDSHDGLIIQRNIALFLSGGERK
ELKLKVTGRIWKEEQNSEAGVCTPNLCS
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggcggagggaatcagctttcgaggtatggatgacacgaggaccactgagctgacagaa
attttccgcgaaaaggaagaaggcctaagacaccaggtccttggtattgataaagaggtt
agggagctgggaatgaaacttgataagatggatgttaagtttgaggaattgaaagagctg
ataatgagctttcgaaaccaagggagcacagtggttaagttggagactagtgcaacatca
gaggatactggattaaaatctaactgcatggaagaggttcagaaccgatgtcctacttgt
agacgagagctgagagatattaggtgcctggcactggagaatgcagcaggatcgcttgaa
cttccatgtgagtattacacgctgggatgtctggagatatttccctatgacagcagcaag
atcaaacacgaaagagtctgcagttttagaccattcagttgcccttatgctggatcagaa
tgcactgtaattggtgatatccctcttttggtttctcatctgcgcgatgaccacaaagtg
gacatgcacactggatgtacttttaaccaccgatacctcaaaacaaatccccgcgaagtt
gaaaatgccacttggatgctaacagtctttcattgttttggtcagtatttctgtcttcac
tttgaagacttccaactaggcaagtcccctgtatacatagcgtttctgcggttcatgggt
gaggaggctgatgctcccaattacagttacagcttagaggtaggagaaaatgaaatgaaa
attaaatgggagggtacaccacgtagtatccgtgatagccaccagaaggttagagacagc
catgatggcctaattattcagagaaacatagcactattcttgtctggaggagagcggaag
gagctgaagcttaaagttacaggaagaatctggaaagaagaacagaattcggaggctgga
gtgtgcacaccaaatctctgtagctaa
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