Daucus carota (carrot): 108214145
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Entry
108214145 CDS
T05350
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108214145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcr04121
]
108214145
Enzymes [BR:
dcr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108214145
Ubiquitin system [BR:
dcr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
108214145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
FAIM1
zf-C3HC4_2
DUF7567
Motif
Other DBs
NCBI-GeneID:
108214145
NCBI-ProteinID:
XP_017241445
UniProt:
A0AAF0WJT3
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All DBs
Position
3:complement(2742091..2745873)
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AA seq
326 aa
AA seq
DB search
MDIDNIECVSSSDGVEDDEIHSSVAAHNHHHRKYPLKPQNISNNIAGLVQGIVPATSVHE
LLECPVCTNSMYPPIHQCHNGHTLCSTCKVQVHNRCPTCRQELGDIRCLALEKVAESLEL
PCKYYTLGCPEIFPYYSKLKHEELCNFRPYSCPYAGSDCAVNGDVPFLVSHLRDDHKVDM
HTGSTFNHRYVKSNPREVTNATWMLTVFHCFGQYFCLHFEAFQLGVAPVYMAFLRFMGDE
ADARNYSYSLEVGGNGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGERKEL
KLRVTGRIWKEEQNSEAGVCIPNLCT
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggatattgataacatagagtgtgtttcatcttcagatggtgttgaagatgatgagatc
cattcttctgttgctgctcataatcatcatcatcgtaaatatccattaaaacctcaaaat
attagtaataatattgctgggttagtacaaggaattgttccagccacaagtgttcatgag
ttgttggaatgtcctgtttgtactaattctatgtaccctcctattcatcagtgtcacaat
ggtcacactttgtgttcaacttgtaaagtgcaagtacataatcgatgtcctacttgtaga
caagaattgggagatattaggtgcctggcattggagaaggtggcagaatctcttgaactt
ccatgcaagtattacacactgggatgtccagagatatttccgtattacagcaaacttaaa
catgaggaactttgcaattttagaccatacagctgcccgtatgctggatcagactgtgct
gttaatggtgatgttccttttctggtttcacatctccgagatgaccacaaagtggacatg
cacactggatctacattcaaccatcgatatgtaaaatcaaatccccgtgaagttactaat
gccacttggatgttaacagtcttccattgttttggtcaatatttttgcctacactttgaa
gcctttcaacttggagtagcacctgtatacatggcatttcttcgattcatgggtgatgag
gctgatgctcgtaattacagttacagcttagaggtaggagggaatggtagaaaactgata
tgggagggtactccacgtagcattcgtgatagtcacagaaaggtaagggacagccatgac
gggctaatcatccaaaggaacatggcactattcttctccggtggagagaggaaggagctg
aagcttagagttacaggaagaatatggaaagaagaacagaattcagaggctggagtgtgc
ataccaaatctttgtacctga
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