Daucus carota (carrot): 108214234
Help
Entry
108214234 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108214234
KO
K20222
importin-5
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108214234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dcr03009
]
108214234
Ribosome biogenesis [BR:
dcr03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
108214234
Pre-60S particles
108214234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IPO5
HEAT_EZ
TPR_IMB1
HEAT
Importin_rep_4
Importin_rep_6
HEAT_GCN1
HEAT_2
TOR1L1_N
Vac14_Fab1_bd
HEAT_MROH2B_C
HEAT_EF3_N
IFRD
Arm
TPR_DNAAF5
Cnd1
VPS15-like_hel
MMS19_C
IBN_N
ARM_TBCD_2nd
ARM_ARMC5
Phasin_2
DUF5862
Motif
Other DBs
NCBI-GeneID:
108214234
NCBI-ProteinID:
XP_017241601
UniProt:
A0AAF1ATC2
LinkDB
All DBs
Position
3:complement(9785268..9795108)
Genome browser
AA seq
1117 aa
AA seq
DB search
MASTESTHLQLAALLGPDFTHFDALLSHLMSADNDRRSQAESLFNLAKQTHPDSLSLRLA
HVLSASSSVEFRALSAVLLRKILTQTDDDDSFLFYNLTSETQNNIKASLIVCLSRECEKS
VIKKVSDTVSELASVILADDKWPELLPFVFQCVSSENSSLREVGFWIFGQLAQFVGETLG
NYFEMLHSVFLRSLGSGVDLSVRNAALGASVSLIQCLEKESERDRFRDLVPLMMGTLNDG
LGLGEEANAQEALEMLIELAGMEPRFFRRQIVDVVGSMLKIAGAGSLEEGTRHLAVEFVI
TLAEARERAPGMMRKLPQFIRGLFEILMQMLLDIEDDSAWHSAVTEHEDAGETTNYSVGQ
ECLDRLAMALGGNTIVPVASEVFPVYLAAPEWQKHHAALIALAQIAEGCSKIMTKNLEPV
VSMVLNSFHDPHPRVRWAAVNAIGQLSTDLGPDLQTKYHHLVLPALGAAMDDFQNPRVQA
HSASAVLNFSESCTPEILAPYLDGIVGKLLVLLQHGKQMVQEGALTALASIADISQEHFQ
KYYDAVMPYLKAILMNATDKANRMLRARSMECISLIGMAVGKDKFRDDAKQVMEVLMSLQ
GSQMETDDPTTSYMLQAWARLCKCLGQDFLPYMNVVMPPLLHSAQLKPDVTITSADSDAE
IEESDDESIETITLGDKRIGIKTSVLEEKATACNMICCYVDELKEGFFPWIDQVAPTLVP
LLKFYFHEDVRKAAVSAMPDLLRSAKLAVEKGQSQGRDESYVKQLLDYIIPALVEALHKE
PETEICASILDSLNECAKICGLLLDENQVKLIVEEIKTVIAASSARKGARAERSKAEDFD
EEERELLKEENEQEEDLFNEVGDLLGTLIKLFKVSFLPFFEDLSPHLNPMLGKDKTSEER
RVAICIFDDIAEECREAAFKYYNHYLPFLLEACNDKSPDVRQAAVYGVGVCAEFGGSAFS
NYVGEALSRLDVVIGHPNKLDSDNIMAYDNAVSALGKICRFQRDKLNAAQIVPSWLSCLP
LRGDLIEAKLVHDQLCSMVERSDMELLGPNNQYVPKIVMVFAEVLCSGGDLASEQTYSRM
ITLLKQLNQTLPPDALASTWSSLQPQQQLTLQSILSS
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atggcctccaccgagtcaactcacctccaactcgctgctctcctcggtcctgatttcacg
cacttcgatgcgctcctttctcacctcatgtccgccgacaacgatcgccgctcccaggcc
gagtcgctcttcaatctcgccaaacaaactcaccctgactcgctctctctcagactcgct
cacgttctatcggcctcgtcgagtgttgagtttcgcgcgttatcggctgtgcttctgcgt
aagattctcacacaaactgatgatgatgactcgtttttgttttataatttgacgagtgag
actcagaataatattaaggcgtctttgattgtgtgtttaagtcgtgaatgtgagaaatcg
gttattaagaaggtttcggatacggtttcggagcttgcttccgtgattttagcggatgat
aagtggccggagctgttgccgtttgtgtttcagtgtgtgagttccgagaattcgagtctt
cgagaggttggattttggatttttggacaattggctcagtttgttggtgaaaccctaggg
aattatttcgagatgttgcattcggttttcttaaggagtttagggagtggtgtggatttg
agtgtgaggaatgcggcgttaggtgcttcggttagtttgattcagtgtttagagaaggag
agtgagagggataggtttcgggatttggtgccgttgatgatgggtacgttgaatgatggt
ttgggtttaggggaagaggcgaatgcgcaggaggcattggagatgttgattgagctagcg
gggatggaaccaaggttttttaggaggcagattgttgatgtggttggttcaatgttgaag
attgcgggggcagggagtttggaggaaggaaccagacatttggccgtggagtttgtgatt
acgttggctgaggcgagggagagagcgcctgggatgatgaggaagttgccgcagtttatt
aggggattgtttgagatattgatgcagatgttattagatatagaggatgattctgcatgg
cattctgctgtgactgagcatgaagatgctggtgagaccacaaattatagtgttggacaa
gagtgtttggataggctagccatggcgttgggtgggaatactattgttcctgtcgcttcc
gaggtgtttccagtctatttggcagctccagagtggcagaaacatcatgcagcactcatt
gcgcttgctcaaattgctgagggttgctccaagataatgactaagaatctggaaccagtt
gtttctatggtattgaactcattccatgatccccatccccgtgttcgatgggcagctgtt
aatgcaattggccaactttcaacggacttgggtcctgacttgcaaaccaaatatcaccat
ttagttctgccagcattaggtgcagcaatggatgattttcaaaatcctcgagttcaggcc
cattctgcttctgcagtgctaaattttagtgaaagctgtacgcctgagatcctggcacct
tacttggatgggattgtgggcaaattgctcgtactcttacagcatggcaagcaaatggtg
caagagggagctttgacagctttagcatcaattgctgatatttcacaggagcatttccag
aagtactatgatgctgttatgccttacttaaaagctattttgatgaacgcaactgataag
gctaatcgcatgcttcgtgctagatccatggagtgcattagtttaattggaatggctgtt
ggaaaagacaagtttagggatgatgcgaagcaggtaatggaggtcctaatgtcacttcaa
ggatctcagatggagacagatgatccaacaactagctatatgttgcaagcttgggccaga
ttatgcaagtgccttgggcaggatttcctcccttacatgaatgttgtgatgcctcctctg
cttcactctgcccagctaaaacctgatgttactattacatctgctgattcagacgctgag
atagaagaatctgatgatgaaagcatcgagactataacacttggagataaaagaataggg
atcaagacaagtgtcttagaggagaaagcgacagcttgtaacatgatctgttgctatgtt
gatgagttaaaggaaggatttttcccatggattgaccaggttgccccaacattagtccca
cttctaaagttttacttccatgaagacgttagaaaggctgctgtttcagctatgccggac
cttttgcgatcagctaaattggctgtagaaaaaggacaatctcaaggtcgagatgagtcc
tacgtcaagcagttattagattacatcataccagctctagtggaggctttacacaaggaa
ccagagacagaaatttgtgctagcattttggattctctgaatgagtgtgcaaagatttgt
ggtctgcttctagatgaaaaccaagtaaagcttatagtggaagagataaaaacggtaatt
gctgctagctctgctagaaaaggagcaagagctgagagatctaaagcagaggactttgat
gaagaagaaagggaactgctgaaggaagaaaatgagcaagaagaagacctctttaatgaa
gttggtgatcttcttggcactttaatcaaattgttcaaagtttccttcttgcctttcttt
gaggacttgtcaccacatctgaatcctatgttgggtaaggataaaacttccgaggaaaga
agggttgctatctgtatatttgacgatattgctgaggaatgtcgagaagcagctttcaaa
tattataatcattatcttccctttctgttggaagcatgcaatgacaaaagcccagatgtt
cgacaggctgctgtgtatggggtaggagtatgtgcagagtttggtggatctgcgttcagc
aattatgttggcgaggctctttctagattggatgttgtaataggacaccccaataagttg
gattcagacaatatcatggcatatgacaatgctgtttcagcacttggaaaaatttgtaga
tttcagcgtgataagttaaatgcagcccagattgttccttcctggttaagctgcttgcct
ttaagaggtgacttgattgaggccaaacttgtacatgatcagctctgctcaatggtagaa
aggtctgatatggaacttttagggcctaataatcaatatgttccaaaaatagtgatggtc
tttgcagaggtcctctgttctggaggagatttggcatcagagcaaacgtacagtcgaatg
atcactttactgaagcagctcaatcagacattacctcccgatgcccttgcatcaacctgg
tcatctctgcaacctcagcagcagcttactctgcaatctatactatcctcttag
DBGET
integrated database retrieval system
