Daucus carota (carrot): 108214259
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Entry
108214259 CDS
T05350
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit C isoform X1
KO
K03252
translation initiation factor 3 subunit C
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
dcr03012
]
108214259
Translation factors [BR:
dcr03012
]
Eukaryotic type
Initiation factors
eIF-3
108214259
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF-3c_N
PCI
EIF3CL_C
Motif
Other DBs
NCBI-GeneID:
108214259
NCBI-ProteinID:
XP_017241669
UniProt:
A0A161XWA6
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Position
3:complement(8738477..8769383)
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AA seq
942 aa
AA seq
DB search
MASKFWTQGDSDTEEEESDIEQDDDEEVNEPTTVNKTGSRYLQDNASDSDDSDGQKRVIR
SAKDKRFEEMAATVDQMKNGMKINDWVSLQESYDKINKQLEKVMRVTESDKVPNLYIKAL
VMLEDFLNQSMANKEAKKKMSSSNAKALNSMKQKLKKNNRQYEELITKCRENPESEEEAE
AEEETEDDEDDDDDNEFLEDPLKAGSDSGEDDDDDDDDDAVTDGPGWEKKLSKKDKLMDK
QFKDPSQVTWDFVNKKFKETIAARGRKGTGRVELVEQLTFLTRVAKTPAQKLEILFSVIS
AQFDVNPSLSGHMPINVWKKCVQNMLLVLDILAQYPEILVDDTVEPDENETQKGADHQGP
IRIWGNLAAFLEKIDVEFFKSLQIIDPHTREYVERLRDEPLFLILAQNVQEYLERVGDNK
AAAKVALRRVELIYYKPQEVYDAMRKLADQTEDGESGGTEASGGFKSVEGSRGPPEFIVI
PKVVSRKTTFPESGRTLLDVLVSVIYKYGDERTKARAMLCDIYHHAIMDEFSTSRDLLLM
SHLQDSIHHMDISTQILFNRAMAQLGLCAFRAGLISEGHGCLSELYSGGRVKELLAQGVS
QSRYHDKTPEQERMERRRQMPYHMHINLELLEAVHLICAMLLEVPNMAANSLDAKHKFIS
KTLRRLLEISERQTFTGPPENVRDHVLAATRALSKGDFQKAFDVIKSLDVWRLLKNRENV
LEMLKSKIKEEALRTYLFAYSRSYDSLSLDQLAKMFDLTDAQTHIIVSKMMITEELHASL
DQPSRCIVFHEVEHSRLQALAFHLTEKLSVLAESNERAVEARIGGVGLDPMPTRRRDGQD
YAATGGGGKWQDNMLFSQGRQGGGGTRSGYGSGRPFAPGPNYSGGYQRDRSGRGGYSSGH
QGTRYQDSSYGGQGRSYQNNSARGSQMDGSVRMVSLNRGIRS
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgaaattttggactcagggagacagtgataccgaggaggaagagagtgatatt
gagcaagatgatgatgaggaagtcaatgagccgacgacagtcaacaagactggtagtagg
tatcttcaggataacgcgagtgacagtgatgattcggatgggcagaagcgtgttattagg
tctgctaaggataagcggtttgaggagatggctgcaactgtggatcagatgaagaatgga
atgaagattaatgactgggtcagtttgcaggagagttatgataagattaataagcagctt
gagaaggttatgagggttacggaatcagataaagttccgaatctttatattaaggcgctt
gtcatgctggaggatttcttgaatcagtctatggcgaataaggaggcgaagaagaagatg
agtagtagtaatgctaaggcgttgaattcgatgaagcagaagttgaagaagaataacagg
caatatgaggagttgattaccaagtgtagagagaatccggagagtgaggaggaggctgaa
gcagaggaggagacggaagacgacgaagatgatgacgatgacaatgaatttttggaggat
ccgttgaaagctgggtcagattcgggagaggatgacgatgatgacgatgacgatgatgct
gtgactgatggtcctgggtgggagaagaaattgagcaagaaagataagcttatggataaa
caatttaaggatccgagtcaggtcacatgggatttcgtcaataaaaagttcaaagaaact
attgctgcgcgtggaaggaaggggactggaagggttgagcttgttgaacagcttacattc
ttaacaagggtggccaagactcctgcacaaaaacttgagattcttttcagtgttatttct
gcacagtttgatgttaatccaagtctcagtgggcacatgcccattaatgtgtggaagaag
tgtgtgcagaatatgctacttgtacttgacattcttgcccaatatcctgaaattcttgtt
gatgatacagtggagccggatgagaatgaaactcagaaaggagctgaccaccaggggcca
atccggatttggggaaacttggctgcattccttgagaagatagatgttgagttcttcaag
agcctacagatcattgatcctcacactcgtgagtatgttgaaaggctgagggatgagcct
ctctttctcattcttgcccaaaacgtacaggagtatttggaacgagttggggataataaa
gctgcagctaaagttgccttaaggagagttgaactcatatactataaaccccaagaggta
tatgatgccatgaggaaattagctgaccaaactgaagatggcgagagtggagggacagaa
gctagtgggggcttcaaatcagttgagggaagtagaggcccgcccgaattcattgtaatt
ccaaaggtcgtgtctcggaaaactacttttccagagagtggcaggacattattggatgtc
ctagtttctgtcatatacaagtatggtgatgagcgaacgaaggcccgtgccatgctttgt
gacatatatcatcatgctattatggatgagttctccacctcccgtgacttgttgctgatg
agccacttgcaggatagtatacatcacatggacatctcaacacaaatactgttcaacagg
gcaatggcacagttgggtctatgcgcatttagggcggggcttatttctgaagggcatggt
tgcctctctgaactatactctggtgggagggtgaaagagctgcttgcacagggtgtgtcc
cagagccgatatcatgataagactccagaacaggaacggatggaaaggaggcgtcagatg
ccgtaccatatgcacataaatctggagcttctagaggctgttcatttgatatgtgctatg
ttactggaggtacctaacatggcagctaacagtcttgatgccaaacacaaattcattagt
aagacgcttcgccgtctgcttgaaataagcgagaggcaaacgttcactggtccccctgaa
aatgttagggaccatgttttggctgccaccagagcattgagcaaaggcgacttccagaag
gcctttgatgttatcaagtcccttgatgtgtggaggctgcttaaaaaccgagagaatgtt
cttgagatgctgaagtccaaaataaaggaagaagctttgaggacctacctttttgcttat
tcacgatcatatgattctttgagcttggaccagcttgctaagatgttcgatcttacagat
gcacagactcacattatagtaagcaaaatgatgatcactgaagagctccatgcaagtttg
gaccaaccatcacggtgcatagtatttcatgaggttgagcacagcaggttgcaggctttg
gcattccacttgacagagaagctatcagtccttgcggaaagcaatgagagagcagtcgag
gcaaggataggtggagttgggctagaccccatgcctacaaggcgcagggatggtcaagat
tatgctgcaactggtggtggaggtaagtggcaagacaatatgcttttttcacagggaagg
caaggcggtggtggtactcggtcaggatatggcagtgggagaccatttgcaccaggacca
aattatagcggcggctatcaaagagatcggtctggtagaggtgggtactcttcaggtcat
cagggtactcggtatcaagattcttcatatggagggcagggtagaagttaccagaataat
tcagccagaggaagtcaaatggatggttcagtccgtatggtcagtctcaatagaggaatc
cgcagttag
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