KEGG   Daucus carota (carrot): 108214269
Entry
108214269         CDS       T05350                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
dcr  Daucus carota (carrot)
Pathway
dcr03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    108214269
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dcr03021]
    108214269
Enzymes [BR:dcr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     108214269
Transcription machinery [BR:dcr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     108214269
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 108214269
NCBI-ProteinID: XP_017241678
UniProt: A0A166AG37
LinkDB
Position
3:12670067..12679555
AA seq 1179 aa
MGGSNYMDIDIDDLFEDDLGDLGEPFLKNVCKKAATSFFEQHGLISHQLNSYNDFIKHGI
QNVFDSIGEITVQPGYDPSKRGDGDWRYASVKFGKVKLAPPTFFTGEKFYNDNAIEFVDF
YPRHARLQNMTYSSKMKVEVHLQVYTQRMVRSDKFKTGKEQYVDKSVCKEIREEIPIGTL
PVMVKSDLCWMKKAKQGDCDFDHGGYFIIKGAEKTFVAQEQICLKRLWLTSNPSWIASYR
HANKRNRVHVKLIDPKSEDIGGGEKILAVYFLGMEIPIWILFFALGVLSDKEVVDLIDGD
LEDGRIVNIMIASIHYADKECDEECAEKFRRRGMALKYVEKKLKSCPFPPAESLEDCIKN
YLFSSLTGFKQKARVLAYMTKCLLQAYTGRRKVDNRDDFRNKRLELAGELLERELKVHLK
HAEKRMVKAMQRDLYKDKVEYIERYLDSSIVTNGLSRAFSTGAWSHPYIRGERTSGVVAN
LGRTNPLQMIAEMRRTRQHVDYTGRVGDARYPHPSHWGKLCFLSTPDGENCGLIKNLAST
GLVSTTVYESILDKLLDCGMDELVDDTSYSLRGKDNIFLDGELVGICRDSASFVTDLRNM
RRSKELPHQVEIKRDEKNREVRIFCDAGRILRPLLVVSNLRKIKSLKGGDYSFQSLLDAG
VIELIGTEEEEDCCTAWGIKYLMMQTSGDTPKKYTHCELDMSFLLGLSAGLTPFCNHDHA
RRALYQSQKHSHQAIGFSTTNPSIRVDTNTNQLYYPQRPLFNTMLSECLGKAENSKMLPK
PEFYNGQCAIVAVNVHLGYNQEDSLVMNRSSLERGMFRSEHIRCYKADVNNKEATLKKQK
IEDAINFGKIPSKIGRVDSLDEDGFPFIGANLQTGDIVIGKHAESGVDQSVKLKHTEKGM
VQKVILSSNDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTAQGIVP
DIVINPHAFPSRQTPGQLLEAALGKGIALGGKERYATPFSTVSVDAITSQLHRAGFSRWG
NERVYNGRTGEMVHSLVFMGPTCYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGI
KFGEMERDCLIAHGASANLHERLFTLSDCSQMHICRRCKHPANVIQRTVTGGRKIRGPYC
RYCQSTEDIVKVSVPYGAKLLCQELFSMGISLKFETQLC
NT seq 3540 nt   +upstreamnt  +downstreamnt
atgggcggttcaaattacatggacatagacatagatgatctctttgaggacgatttaggg
gatctaggagagcctttcttgaagaatgtctgtaaaaaagctgcaacatcgttttttgaa
caacatgggttgattagtcaccagctcaactcatataatgatttcataaaacatggtatc
caaaatgtttttgattccattggggagattacagttcagcctggttatgatccgtccaaa
aggggggatggtgactggaggtatgcatcagtgaagtttgggaaggtcaagctggcccca
ccaacgtttttcactggtgagaagttctacaatgataacgctatagaatttgtggacttc
tatcccagacatgctcgcttgcagaatatgacatactcatccaagatgaaagttgaggtt
catctccaggtatatacccagagaatggttaggagtgacaagttcaaaactgggaaagaa
cagtatgtagacaaatctgtatgtaaggagatccgggaggagattcctataggaacgctt
ccagtgatggttaaatctgatttatgctggatgaaaaaagctaagcaaggggattgtgat
tttgatcacggaggctatttcataatcaagggagctgagaagaccttcgtcgctcaagaa
cagatctgcttgaagaggctttggttgaccagtaatccttcttggattgcttcatatcgt
catgctaataaaaggaacagagtccatgtaaaacttatagaccctaaaagtgaagacata
ggaggcggcgaaaaaattcttgctgtctattttttggggatggagataccaatatggata
ttgttttttgctcttggcgtattgtctgataaagaagttgttgatttgattgatggtgat
cttgaagatggaaggattgtaaatataatgattgcatcaattcactatgctgacaaagag
tgtgatgaggagtgtgctgagaagttccgtagaaggggaatggctcttaaatatgtagaa
aagaaacttaaaagttgtccattcccccctgcagaatctcttgaagattgcattaagaat
tatctcttctccagtctcactggcttcaagcagaaggctcgtgttcttgcctacatgacg
aagtgcctcttgcaggcttatactggccgtagaaaagttgataatagggatgatttcaga
aacaagaggttagagttggctggtgagttgcttgagcgtgagcttaaagttcatcttaaa
catgctgaaaaacgtatggtcaaggcaatgcagagagatctttacaaggataaagtggag
tacattgaacgctatctggattcatcaattgttacaaatgggctttcaagggcattttcc
acaggagcttggtctcatccgtacatcagaggggaaaggacctctggtgtagtggcaaat
cttggtcgaacaaatccgttgcaaatgatagctgaaatgaggagaacacgtcagcatgtt
gattacacagggagagttggtgacgcaagatacccgcacccttctcactggggtaagttg
tgtttcctttcgactcccgatggagaaaattgtggcctcataaaaaatcttgccagcact
gggcttgtgagtacaactgtatatgagtcgattcttgacaaattgcttgattgtggcatg
gatgaattggtagacgatacttcatattctcttcgtggcaaggacaatatattcctggat
ggtgaactggttggaatatgtagagattctgcatcgtttgttacagatttacgaaatatg
agacgctcaaaggaacttcctcaccaggtggagattaaaagagatgagaaaaatagagaa
gtgcgcatattttgtgatgctggaaggattttacgacctcttttagttgtcagtaattta
agaaaaattaaatcattgaaagggggagattactcttttcagtctcttttggacgcagga
gttattgagctgataggaactgaggaggaggaagactgttgcacagcatgggggattaaa
tatcttatgatgcaaactagcggagacacacccaaaaagtacacacactgtgaactggac
atgtcatttctcttgggtttaagtgccggactgacccccttttgtaatcatgaccatgca
agaagagccctctaccaatcacaaaagcactcacatcaggccattggtttttctaccacc
aacccaagtatcagagtagacacaaatacgaatcagttatattatcctcaaagaccactt
tttaatacgatgctttcagaatgtcttggaaaagcagaaaacagcaagatgcttcccaag
cctgaattttataatgggcagtgtgctattgttgctgtgaatgttcaccttggttacaac
caggaagattccttggttatgaatcgctcttcactcgagcgaggcatgtttagatcagag
cacattagatgttataaggctgatgttaacaacaaagaagctactttaaagaagcagaaa
atagaggatgcaataaactttgggaagatcccaagtaaaattggtcgggttgacagctta
gatgaggatggttttccatttattggtgcaaacctgcagactggtgatatcgtcattgga
aaacatgctgaatcaggggttgatcagagtgttaaactgaagcatactgaaaagggcatg
gttcagaaagtaatactttcttcaaatgatgaaggcaaaaactttgctgtagtatctctg
agacaggttcgatcaccatgtcttggagacaagttctctagcatgcatggacaaaagggt
gttttaggttttctggaatctcaggaaaacttcccttttacggcgcaaggaatagttcct
gatatcgtcataaacccacatgcatttccttcacgtcaaactcctggccaacttctggag
gctgctctgggaaaagggattgcccttgggggtaaagaaagatatgccacccctttctcc
actgtatctgttgatgccataacaagtcaacttcacagggctggcttttctagatgggga
aatgaaagagtatacaatggtcgaactggtgaaatggttcattccctagtgtttatgggc
ccaacttgctaccagcgcttgatccatatggctgaagacaaggtaaagtttaggaacacg
gggcctgttcatcctctcactagacaaccagttgccgacagaaaacgttttggaggaata
aagtttggggagatggagcgtgattgcctgatagcccatggggcttcggctaatttgcat
gaacgtctcttcacacttagtgactgctcacagatgcacatctgtcgtagatgcaaacac
cctgcaaacgtgatccagaggacggtgacgggaggacgcaagattcgcgggccatattgc
cgatactgtcagtctactgaagacattgtgaaagtgagtgtgccttatggggcaaagcta
ctttgccaggagcttttcagcatgggcatatctttgaagttcgaaactcagttgtgttga

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