Daucus carota (carrot): 108214390
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Entry
108214390 CDS
T05350
Name
(RefSeq) cryptochrome-1 isoform X2
KO
K12118
cryptochrome 1
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
108214390
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Cryptochrome_C
Motif
Other DBs
NCBI-GeneID:
108214390
NCBI-ProteinID:
XP_017241860
UniProt:
A0AAF0WJE2
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Position
3:827872..832734
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AA seq
667 aa
AA seq
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MMSGGGCNIVWFRRDLRVEDNPALAAGVRAGAVLALYVWAPEEEGHYQPGRVSRWWLKQS
LNQLDSSLRSLGTTLITKRSTDSVSSLLQVVKSVGATQLFFNHLYDPLSLVRDHRVKEVL
TAHGVTVHSFNADLLYEPWEVLDDVGQPFTTFAGFWSKCLSMPYDPDSPLLPPKRIISGD
VSLCPSDPLVFEDESEKGSNALLARAWSPGWKSADKALTTFINGPLIEYAKNRRKADSAT
TSFLSPHLHFGEVSVRKVFHLVRLKQVLWNNEGNQAGEESVNLFLKSIGLREYSRYISFN
HPYSHEKPLLGHLKFFPWVIDEDYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVS
SFFVKILQLPWRWGMKYFWDTLLDADLESDALGWQYISGTLPDGRELDRMDNPQFEGYKF
DPNGEFVRRWLPELARLPTEWIHHPWNAPPSVLQAAGVELGSNYPLPIVGIDAAKARLQE
ALAQMWQHEAASRAVIENGTEEGLGDSSDSAPIAFPQDMEEDRTTLRNNPTTTTIRRYED
QMVPSMTTSLVRVEEEETSSDLRVERGRAEVPTTLNMDEEPGTDILNQVNNLQHFNIAMA
LRDAEDSTAESSSSTIRRERDGGVVPVWSPPASSYSEQYVGEENSFLQRHPQSHQVMNWT
QRLSQTG
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctggtggtggatgtaatatagtatggtttagaagggatctgagagtagaggat
aatccagctttagcagctggtgttagagctggagctgtgcttgcactgtatgtatgggca
cctgaggaagaaggccactatcagcctggtagagtttctaggtggtggcttaagcaaagt
ttgaatcaacttgattcatctttgaggagtcttgggactacccttattacaaaaagatca
actgatagtgtttcttctcttcttcaagttgttaagtctgttggggctactcagctcttc
ttcaaccacttatatgaccccttgtcacttgtgagggatcaccgagtaaaggaggttcta
actgcccatggagtaactgtccattccttcaacgcagacttgctatatgaaccatgggaa
gttcttgatgatgtaggtcagccgttcacaacatttgcaggtttttggagtaaatgcctt
agcatgccttatgatccggattcgccacttctcccccctaagagaattatctcaggtgat
gtatctctgtgcccttcagacccattggtatttgaagatgaatcggaaaaaggcagtaat
gcactccttgctcgggcatggtcacctgggtggaaaagtgctgataaggcactgactaca
ttcattaatggaccattaattgagtatgctaagaatcgcagaaaggctgatagtgctaca
acttcatttctgtctcctcatttacattttggtgaagtgagtgtgcggaaagtctttcat
cttgttcgcctgaagcaagttttgtggaacaatgaagggaaccaagctggcgaagagagt
gtcaacttgttccttaagtcaataggtcttagagagtattcgagatacataagttttaat
cacccatacagccatgagaagcctcttcttgggcacctaaagttttttccttgggtaatc
gacgaggactacttcaaggcatggaggcaaggtagaactggttatccgctggttgatgct
ggcatgagagagttatgggccacaggttggctacatgatcgaattcgagttgttgtatcc
agtttctttgttaaaattctgcagcttccatggagatggggcatgaagtatttctgggat
accctgttagatgcagatcttgaaagtgatgctcttggttggcagtatatatctggaact
ctccctgatggtcgtgagttggatcgtatggataatcctcagtttgagggctataagttt
gaccctaatggtgagtttgtacgaagatggcttcctgaacttgctagactgcctactgaa
tggatacaccatccttggaatgcaccaccatctgtactccaagctgcaggggtcgagctt
ggttctaactatcctcttccaattgttggaattgatgctgctaaagccaggttgcaagaa
gcccttgcacagatgtggcaacatgaagcagcatccagagcagtaattgagaatggaact
gaagaagggttaggagactcatctgattcggcccccattgcgtttccacaagacatggaa
gaggaccgtacaacattaaggaacaatccaacaactacaacaattcggcgttatgaggat
cagatggtcccaagcatgaccacttccttggtaagggttgaagaggaagaaacttcttct
gatcttcgagtagaacgtggcagagcagaagtaccaacaactcttaatatggacgaggaa
ccaggaactgacatacttaatcaagtcaataatctgcaacattttaatattgcaatggcg
ctgagggatgctgaagattccacagcagaatcttctagtagtactataaggagagaaagg
gatggaggagtggttccagtatggtctcctccggcttctagttactcagaacaatatgtt
ggtgaagaaaattctttcttgcagaggcatccacaatctcaccaagtcatgaactggaca
caacggctttctcaaacagggtaa
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