Daucus carota (carrot): 108214458
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Entry
108214458 CDS
T05350
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
108214458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcr04121
]
108214458
Ubiquitin system [BR:
dcr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
108214458
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
F-box-like
LRR_14
F-box
LRR_8
Motif
Other DBs
NCBI-GeneID:
108214458
NCBI-ProteinID:
XP_017241944
UniProt:
A0A166CEK0
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Position
3:complement(61242823..61247453)
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AA seq
580 aa
AA seq
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MAYSFPEEVLEYVLSFIKTDKDRNAVSLVCKSWYEIERWCRRRVFIGNCYAVNPRIMIRR
FPEIRSVEIKGKPHFADFNLVPEGWGGYFHPWVVAMARAYPMLEEIRLKRMVVSDDCLEM
IAKSFKNFRVLVMSSCEGFSTDGLACIAANCRNLRELDLRESEVEDLSGHWLSHFPDTCT
SLESLNIACLGSEVCFSALERLVSRCPNLRKLQLNRTVPLEKLPNLLIRAPELVEFGTGA
YSAELRPELLSNLVNAFAGCKKLKALSGFWDVVPAYIPAIYPVCCGLTSLNLSYANIQSP
DIIKLVSQCQNLQRLWVLDYIEDSGLDVLATCCKKLEELRVFPSDPYDVEPNVSLTEQGL
VSVSEGCPKLQSVLYFCRRMSNAALFTIAKNSPNLIRFRLCIIEARAPDYLTYEPLDAGF
GAIVENCRELRRLSLSGFLTDRVFEYIGKHAKKLEMLSIAFAGQGDLGLHHVLSGCDSLR
KLEIRDCPFGDKALLANAAKLETMRSLWMSSCPVSYGACKLLGQKLRRVNVEVIDERGTP
ESRPDSCHIEKLYIYRTLSGPRVDTPDFIWTMDEEGNTPQ
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggcgtattcatttccggaagaagtgttggaatatgtgctgtcatttataaaaaccgat
aaggatcgaaatgctgtttcgttggtgtgtaaatcttggtatgagattgagaggtggtgt
aggaggagggtttttatagggaattgttacgcggtgaatccaaggattatgattaggagg
tttccggagattaggtcagtggaaattaaggggaagccgcattttgctgattttaatttg
gttccggaagggtggggaggttattttcatccgtgggtggttgcgatggctagggcttat
ccgatgttggaggagattaggttgaagaggatggttgtgagtgatgattgcttggagatg
attgcgaagagttttaagaattttagggttttggttatgtcgtcttgcgaggggttttcg
acagatgggcttgcttgtattgctgctaattgcaggaacttgagggaattggacttgcgc
gagagtgaagtggaagacttgagtggacattggttaagccattttcctgatacttgcact
tcgcttgaatcactaaacatagcttgcttaggttctgaggtgtgtttctcagccctggag
cgccttgtttctaggtgccccaacctgagaaagcttcagctcaaccgtactgtacctctt
gaaaagctacctaaccttctaatcagggcccctgaactagttgagttcggcacaggcgct
tattcggcagaactccgaccagagttactatcgaacttagtgaatgcttttgcaggttgc
aagaaactaaaggccttgtctggtttttgggatgtggtaccggcatatattccagctatt
tatccagtctgctgtggactcacatctttgaacttaagctatgccaatatccaaagtccg
gatattataaagcttgttagccagtgtcagaatttgcagcggttatgggtgttggattac
attgaagacagtggccttgatgttcttgccacttgttgtaagaagctagaggaactacgg
gtttttccatctgatccatacgacgtggaaccaaatgtgtccttaacggaacagggactt
gtctcagtttctgaaggctgccccaagctccagtctgttctatacttctgccgtcgaatg
tcaaatgctgcactgtttaccattgctaagaatagcccgaacctaattcgtttccgtttg
tgcattattgaggcccgtgctcccgattacttgacttatgaaccacttgatgctggtttt
ggggccatagtagagaattgcagagaactgcgcaggctttcactttctgggtttctcact
gatcgtgtgtttgagtacattggcaagcatgcaaagaagttagagatgctctctatagca
tttgctggacagggtgacttgggcctccatcatgtattgtctggttgtgatagccttcgg
aagcttgagattagggactgtccttttggagataaggctctgttggccaatgctgcaaag
ctggagacaatgcgatccctttggatgtcttcttgcccagtaagttatggagcttgcaag
ctgctaggacagaagttgcgtagggtcaatgttgaagtaatagatgagaggggaacccca
gagtcgaggcccgatagctgtcatattgagaagctttatatctaccggactctctcaggg
ccaagagttgacacacctgattttatatggaccatggatgaagaggggaatacaccacaa
tga
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