Daucus carota (carrot): 108214484
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Entry
108214484 CDS
T05350
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dcr03009
]
108214484
03036 Chromosome and associated proteins [BR:
dcr03036
]
108214484
Enzymes [BR:
dcr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108214484
Ribosome biogenesis [BR:
dcr03009
]
Eukaryotic type
Pre-60S particles
Helicases
108214484
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
108214484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
FlpD
CMS1
Motif
Other DBs
NCBI-GeneID:
108214484
NCBI-ProteinID:
XP_017241982
LinkDB
All DBs
Position
3:7505434..7511841
Genome browser
AA seq
686 aa
AA seq
DB search
MPSFPLSENLSPEKKEKKMKKLKESVNLDSSIEKKVKKEKKKRALSDSDDFTAIDSEKKS
KKKEKKRKLSEDEDERSETSSERGEPVNLKEKKSKKAKLMEEAEEEEENPNAVSNFRISE
PLRNKLKSKGIEALFPIQAMTFNIILEGSDLVGRARTGQGKTLAFVLPILESLTNGAFKG
SRKTGYGRAPSVLVLLPTRELATQVAADFETYGGSLGLNSCCLYGGAPYQPQHTQLIRGV
DIVVGTPGRIKDHLERGNLDFSSLKFRVLDEADEMLKMGFVDDVELILGKVEDASKVQTL
LFSATLPIWVKQIAARFLKPDKKTADLVGNERMKASTNVRHIVIPCSSSARAQLIPDIIR
CYSSGGRSIIFTETKDSASQLAGILPGARALHGDIQQATREVTLSGFRSGKFMTLVATNV
AARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGKSGVAVMLYDPRRSNFSRIERESG
VKFEHMAAPQPADIAKAAGLEAVETINEISDNVIPIFKSAAEELMSTSGLTPVELLAKAL
AKTTGYTEIKSRSLLTSMENFTTLLLEAGRPIYTPSVAFSILRRFLPEEKVETVKGLALT
ADGRGAVFDVSAADLDTFLSGQENAAGVSLTVVTELPELQEKEQSRGGRFGGGGRGGRFS
GGRGGGFNDRRNDRFSGGRGGGRNRW
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgccttcttttcctctctccgaaaatctctcccccgagaaaaaagagaagaagatgaag
aaactaaaggaatcagttaatctcgactcttcgatcgagaagaaggtcaagaaggagaaa
aagaagagagctttatctgattccgacgactttacggcgattgattcggagaagaagagt
aagaagaaggagaagaagcgaaagttatcggaagacgaagacgagaggagcgagacgagc
tcggagcgcggcgagccggtgaatttgaaggagaagaagagtaagaaggctaagttgatg
gaggaagcggaggaagaggaggagaatccgaatgcggtgtcgaatttcaggatttcggag
ccgttgaggaataagttgaagtctaaggggattgaggcgttgtttccgatacaggcgatg
acgtttaatattattcttgagggttctgatttggttgggagggctcggactggtcagggt
aaaaccttagcatttgtgttacccatattagagtccttgacaaatggagcatttaaagga
tcacgaaagactggttatgggagggcaccaagtgttcttgtgctattgcctaccagggag
ctggcaacacaggtggctgcggattttgaaacctatggagggtctttggggttgaattca
tgctgtttgtatgggggtgctccctaccagcctcagcatacgcagctgattagaggggtt
gatatagttgtgggaacgccgggtcgtatcaaggatcacttagaaagaggaaatcttgat
tttagctctttgaagttccgtgttcttgatgaagctgatgaaatgcttaagatgggtttt
gttgatgatgttgaacttatattaggtaaagtagaagatgcaagcaaagttcaaactcta
ttattcagcgcaaccttgcctatttgggtgaagcagattgctgccaggtttctgaagcca
gataagaaaaccgccgatcttgttggtaatgagagaatgaaggctagtacaaatgtcaga
catattgttattccctgctctagttcggcaagagcacagctcattccagatattattcgc
tgttatagcagtggaggacgttcaataatttttaccgagaccaaagattctgcttctcag
ttagctggtatattgcctggagcacgtgctttgcatggggatatacaacaggccacacgc
gaggttacactttctggatttagatcaggcaaatttatgacgttggtggcaacaaatgtg
gcagcacggggactcgatatcaatgacgtgcagttgatcattcagtgtgaacctccacgt
gatgtagaagcatatattcatcgatctggacggacagggagagcaggaaaatctggtgtt
gctgttatgctttatgatccaagaaggtcaaacttttctaggatagagagagaatccggt
gtaaagttcgaacatatggctgctcctcagccagctgatattgctaaagctgctggctta
gaagctgtagaaacaatcaatgaaatttctgataatgtaattccgatctttaagtctgcc
gccgaggagctaatgagtacttctggactgacaccagtagaactgctggcaaaggcactt
gccaaaaccactggatatactgagattaagagtaggtcactccttacttctatggagaac
ttcaccacattacttcttgaggctggaagacccatttacacgccatctgttgcttttagt
atcttgaggaggtttttaccagaagagaaagttgaaactgtcaagggtcttgctcttaca
gctgatgggaggggagctgtatttgatgtgtctgcagcagatttggatacatttctttct
ggtcaggaaaatgcagctggtgtgagtttaacggtggtaacagaattgccagagttgcaa
gagaaggagcaatccagagggggaagatttggaggtggtggtcgtggtggtaggttttct
gggggaagaggtggtgggtttaatgatcgaagaaatgacagattttcaggagggagaggt
ggtggtagaaacagatggtga
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