Daucus carota (carrot): 108214488
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Entry
108214488 CDS
T05350
Name
(RefSeq) autophagy-related protein 11
KO
K08330
autophagy-related protein 11
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
108214488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108214488
03029 Mitochondrial biogenesis [BR:
dcr03029
]
108214488
Membrane trafficking [BR:
dcr04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Scaffold protein
108214488
Mitophagy
Scaffold proteins
108214488
Mitochondrial biogenesis [BR:
dcr03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
108214488
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG17_like
ATG11
DUF8429
FliD_C
ubiquitin
Motif
Other DBs
NCBI-GeneID:
108214488
NCBI-ProteinID:
XP_017241987
UniProt:
A0A166AER8
LinkDB
All DBs
Position
3:11879268..11887824
Genome browser
AA seq
1148 aa
AA seq
DB search
MASTSVSEGVVQRGKLLVHLAENGHSFELGCDEYTLVEEVQRYIESVSGVHVNDQLLLCA
DMKLDSQKQLSAYGLPADDREVYLYNRARMRSSSPSPAPEQVELVETPDPQSPTSARNPH
PLDDASDPALKALASYERQFRYHYQCGHAIYARTMLKYEICERFLREQKVQVKALEIARG
NLDHYYRMILQNYNDFVKLNYIQHRSHSSLLVNFGRDVEKLRSCKLIPPLQTGNRKCLLD
FVKEENLRKTVEDCSNSHRQFETKVSEFKQEFGELKRSTEHLFSSNSKTVDIIKNVELTV
KEGLKYITEQKSVMQTLSKDVSTVKKLVDDCLTSQISSSLRPHDAVSALGPMYDGHDKSY
LPRMQTCERSISNLLDFCRSKKDEMNMFVQGYMQKIAYIQFTIKDVRFKFSVFNEALKRQ
SDQFEHLKVVRGIGPAYRACLAEIVRRKASMKLYMGMAGQLAERLATKREAEVRRREEFL
KVHSSYIPRDILASMGLYDTPNQCDVNIAPFDTNLLDIDISDIERYAPEYLVGMSSKIEK
QGSMKSSLSLSHDSFASEVEESSLGATDKHSSEDVLEASELVEIAGTSKLEVENAKLKAD
LASAIAVICSFCSDVEYESLDDSKVENLLKDAAEKTAEALHLKDEYGKHLISMLKNKQMQ
CESYEKRIQELEQRLSDQYVQEQKFSVDKNASIFIPLINKADSKSEVLGEGEALMASVAM
DEVSSATNSEHVKSGVLDKHGRPCEGLDENMTDSSGILNPQLDSSMLEPNHEDLHPHKDF
KEPILADIGMGLAASSTADSISRPPNTLFSETDIDRNLDSKRSDELILELQHVIEEKSNI
LSEKETKIDNLMEEIVNLERELEISRKLLDESQMNCAHLENCLHEAREEAQTHLCAAERR
ASEYTALRASAVKMHSLFERLKTCVSSGSVAAFAESLRALSQSLANSASDKEDDSTAELR
GCIRVLADKVGSLSKHRADLLDRYSKAEAANDQLTKELEEKKELVNTLYMKHQSEKQANK
EKISFGRLEVRELAAFVLNSAGHYEAINRNCHNYYLSTESVALFVDHLPQRPSYIIGQIV
HIERLVVSPVGAEHNNKDMVDFLTTDMGSSRMTAGSAANPYDLPIGCEYFIVTVAMLPDT
TLHSQPTS
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atggcttctacgagtgtctcggaaggtgttgttcagagggggaagttgttggttcacttg
gcggaaaatgggcattctttcgagcttggttgcgatgaatacacgctcgttgaggaggtt
cagcggtatattgaatcggtttctggggttcatgtcaatgatcagcttttgttgtgtgct
gatatgaagttggactcgcagaagcagctttctgcgtatgggcttccggctgacgatcga
gaagtgtatttgtataacagagctagaatgcggagtagttcaccgagtcctgcaccggaa
caagttgaattggttgaaactcctgacccgcaatcaccgacctctgcacgtaatcctcat
cccttggatgatgcttctgaccctgctctcaaggctttggcttcatacgagagacagttt
agataccattaccaatgtggtcatgctatttatgctcgtactatgctgaaatatgagatt
tgcgaaaggtttttgagggaacaaaaggtgcaagtgaaggctttagagattgcacgtggt
aatctagatcattactataggatgatattgcagaattataatgactttgtgaagcttaat
tatatacaacaccggagtcattctagtcttctagttaattttggaagggatgtagagaaa
ctgaggtcctgcaaacttatccctcctttacaaacagggaaccgaaagtgcttgttggat
tttgtgaaagaagagaacttgaggaagacggtggaagattgtagcaattcacataggcag
ttcgagactaaggtttctgaatttaagcaggagtttggagagcttaaacgcagcactgag
cacttgttctccagcaacagtaaaactgtagatattattaaaaacgttgaactcactgtc
aaggaaggcctaaaatacattacagagcagaaaagtgtgatgcaaacattaagcaaagat
gtcagtacagtgaaaaaacttgtggatgactgtctaacgagccaaatttcgtcttctctc
cgtccacatgatgccgtttcagcactaggccctatgtatgatggccatgataaaagttac
cttcccaggatgcaaacttgtgagcgatcaatctccaatctacttgatttttgtaggagc
aaaaaggatgaaatgaatatgtttgttcagggttacatgcaaaagatagcatatattcag
ttcacaatcaaagatgtacgctttaagttttctgttttcaacgaggcattgaagcgtcag
agtgatcaatttgagcatttgaaggtggttcgtggcattgggcctgcatatagagcttgc
cttgcagagatagtgagacgaaaggcttcaatgaagctctacatgggcatggcgggacaa
ttggctgaacgacttgctacaaagagggaagctgaagtcaggagaagagaggagtttcta
aaagtacatagttcttatatacccagggatatactagcatctatgggattatatgacact
cctaatcaatgtgatgttaatatagctccttttgatactaatttgttagatattgacata
tccgatatagagcgttatgctcctgaatacttggttggaatgtcgtccaagattgagaag
caaggaagtatgaagagttcactttctttgtctcatgatagttttgcatctgaagttgaa
gagagttccttgggtgctactgataagcatagctccgaagatgttcttgaggcttctgag
ctggtagagattgctggaactagcaagttggaagttgagaatgcaaagctaaaagctgat
cttgcttctgcaatagctgtaatttgttcattttgttctgatgtcgaatatgaatcgctt
gacgacagcaaagtggaaaatttattaaaagatgctgcagagaagactgctgaagctttg
catttgaaggacgaatatggaaaacatttaatttctatgttaaagaataagcaaatgcag
tgcgagtcatatgaaaaacgcatacaagaactcgaacagagattgtcagatcagtatgtg
caggagcagaagttttcagttgataaaaatgcatctatctttattcctttgattaacaag
gctgatagtaagtcagaagtcttgggtgaaggagaagctcttatggcgtcagtagccatg
gatgaggtttcctctgccaccaattctgaacatgtaaaatcaggagttctggacaaacat
ggaaggccttgtgaaggtttggatgagaatatgacagattcgtctggaatcctaaatcct
cagttagattcatctatgctagagcctaatcatgaggatctgcatccccacaaagacttt
aaggaaccaatattggcagacattggtatgggtctagcagctagttccacagctgatagc
atatctcggcctccaaataccttattttctgagacggacattgatcggaatttggattcc
aaaagaagtgatgaactcattctggaattgcaacatgtgatcgaagagaagtccaatata
ttaagtgaaaaggaaaccaaaattgataatctgatggaggagattgtcaatcttgaaagg
gagttggaaatcagcaggaagcttttagatgaatcacagatgaactgtgcgcacttggag
aattgtttacatgaagcaagagaggaagcccaaacccatctttgtgcagctgagaggagg
gcatcagagtatactgcactacgggcctctgctgtaaaaatgcacagtctttttgaaaga
cttaagacatgtgtatcttctggaagtgttgctgcttttgctgagtcattgcgtgcttta
tctcaatctttggccaattccgccagtgacaaggaagatgatagcactgcagagcttcgg
ggatgcattcgcgtacttgctgataaagtcggttctttgtctaagcaccgtgcagatcta
cttgacaggtactcgaaggctgaagctgcaaatgatcagcttaccaaggagttggaagag
aagaaagagctggtcaacaccctgtacatgaagcatcaatcagagaaacaggcaaacaaa
gagaagatatcctttggccggttggaagtacgtgagctggctgcattcgtactcaattct
gctggtcattacgaggccatcaaccggaactgccataattactatctctctactgaatcc
gtggctttgttcgttgatcatcttccacagcgtcctagctatataattggacagatcgtg
catattgaacgattagtagtcagcccagttggagctgagcataataataaagacatggtc
gacttcctgacaactgacatgggaagcagtcggatgactgcaggatcagctgccaaccca
tatgatcttcctattggctgtgaatattttatagtaaccgtagcaatgttacctgacacc
acccttcattcgcagcccacttcctga
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