Daucus carota (carrot): 108214492
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Entry
108214492 CDS
T05350
Name
(RefSeq) OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 6
KO
K12655
OTU domain-containing protein 5 [EC:
3.4.19.12
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dcr01002
]
108214492
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcr04121
]
108214492
Enzymes [BR:
dcr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108214492
Peptidases and inhibitors [BR:
dcr01002
]
Cysteine peptidases
Family C85
108214492
Ubiquitin system [BR:
dcr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
108214492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OTU
Peptidase_C65
UBA_9
Motif
Other DBs
NCBI-GeneID:
108214492
NCBI-ProteinID:
XP_063945798
LinkDB
All DBs
Position
3:59296765..59305792
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AA seq
505 aa
AA seq
DB search
MTRILVQRGSNKGERAGPSSSGPSQNSAVTSEVEIVEEVQEKDFAEEVSGIGSGDESKVV
QSDESLGQVDKDDEEVLDKEKAGEDVVRDLTQRSGGLRIVEEERQIGTGMGCSHPPPPPV
PPPKPFSGNVNPRRFSSGSSNATRSGSSRRATPWPVVPTRTSPTGSRPTSPRSHCENEGY
NSADEQSPRFGSSYSDAEREHQFEIDLRRATGLEVKRMLEDGNCLFRAVADQVYGDSELY
DLVRQMCIDYMERERDHFSQFITEGFISYCKRKRRDKVYGNNMEIQAFCEMYNRPIHIYS
YSAEPINIFQGSYNTDTPPIRLSYHHGNHYNSLVDPRRVTVGAGLGFSSLRGSNVDKDQV
SAAIKAQQEQQIDNALLAEGRFYSDLELTEKEMERMVMEASRAEYLAEDKFKQVGRRESS
TSAAGAEPSSSGARPSGSKTNAEGGNEHGLPTTVLTNSMQMVLAMGFSYLQVIEAYSIFG
EDVDSMVCYLLETSSSSRRKGKATE
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgactcgaattttggttcagagaggttctaataagggtgagagggctggtccgtcttct
tctggtccttcccagaattcggctgttacttcggaagtggaaattgttgaggaagttcaa
gaaaaggattttgctgaggaggtttctggaataggaagtggagatgagagtaaggttgtg
caaagtgatgaatctttagggcaggttgataaggatgatgaggaggttcttgataaagag
aaggctggggaagatgttgttcgggatttgacgcaacgaagtggtggtttgaggattgtg
gaggaggaaaggcagatcgggacagggatgggatgttcccaccctcctcctcctccagtg
ccaccgcctaaacctttttctggaaatgtcaatccgaggaggttttcatcgggttcctca
aacgcgacaaggagtggatcttctaggagagcgacaccatggccggttgttccaaccagg
acctcaccaactggatctcggcctacttctcctaggtctcattgtgagaatgagggctat
aatagtgccgatgaacagagtccacgtttcggatcctcttacagcgatgcagagagagaa
caccagtttgagattgatttaagacgtgcaacaggtttagaagtgaaaagaatgttagag
gatggcaactgcctctttcgggctgttgcagatcaagtttacggtgattctgagttgtat
gatctggtcagacaaatgtgcattgattatatggagagagaaagagatcacttttctcaa
tttataactgaaggcttcatttcttattgcaagagaaagagaagggacaaggtttatgga
aacaatatggaaattcaagctttttgtgagatgtataatcggcctattcacatctattct
tatagtgcagagcctatcaacatatttcaaggaagctacaatactgacactcctcctata
agactaagctaccatcatgggaatcattacaattcacttgttgatccacgacgagtgacg
gttggtgctggacttggatttagtagtctgcgaggatcaaacgttgacaaggatcaggta
tcagctgcaataaaagctcagcaagaacaacagattgataatgcactgctagcagaggga
cgtttctattcagatctggagctgaccgagaaagaaatggaacgcatggtgatggaagct
tctagggctgagtatcttgctgaggacaagttcaagcaagttggacgaagagaatcctct
acttctgctgctggtgctgaaccatcatcatctggtgctagaccatctgggagcaaaacc
aatgctgaaggtgggaacgagcatggattaccaactactgtactgaccaacagcatgcag
atggtactagctatgggattcagctatcttcaagtgatcgaggcatacagcatttttggg
gaagatgttgattctatggtatgttatctattagagactagcagtagcagcaggcggaag
ggcaaagcaactgaatga
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