Daucus carota (carrot): 108214547
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Entry
108214547 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108214547
KO
K13146
integrator complex subunit 9
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dcr03041
]
108214547
Spliceosome [BR:
dcr03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
108214547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-Casp
Lactamase_B_6
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
108214547
NCBI-ProteinID:
XP_017242098
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All DBs
Position
3:36414214..36438790
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AA seq
696 aa
AA seq
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MKFTSLSQGKGFYFPPCQILNICGLRVLFDCPLDLSGLSIFSPIGFDEEEYKVSSCNELR
ESECLDRKRQKVEKPLDASNLIHSEPYYKTVNDLHLWNASFIDVVVISSYMGMLGLPFLT
RQKGFSAKIYATEATARLGKLMMEDLVAMHAEFRQLYGPGESGCTQWMKWEELDMLSSVI
KDIVIGKDGTELGSWMPLYSAADVMDCMQKVQALKYAEEACYNGTLLIMALSSGLEIGTC
NWTICGPKGTVSYLSSSCFVSSTSMDFDYHGFQGSDMIIYSDFTTWKSGNDVDDYSSYSA
PSTSKLSDFSEDDWKVRAESLLKLDEGEEEVEKLSFLCTCCIDSIKSGGSVVIPIGRLGI
ILQLLEQIADSLEASNIKAPIFVISYVADELLAYTNIIPEWLCKQRQERMYSGQSLFGHV
DLLKNKRLRLFPTLHSLELLKSWEEPCVVFCPHWSMRLGPAVHLLRRWCGDPNSLLIMED
GEDTELAFLPFKPMTIKVLQCSFLSGIKLQNIQPLLDILQPKVLMIPENSRQYIPTFNTS
ISLKYFPEKETLCIPKVKTASELNIAADLTMQILSKNLKHKETSIARLKGSLLLEHGKQH
LIFQKNQEASSQTKSLLHWGKLDPKDLLVSLQKMGINGYVEQENSDTESESLTIMHISEP
RKALIEMKGTNTVISTDDEDMTALICEAISSNLDCI
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttacaagtttgagccaaggcaagggattctatttccctccatgccaaatactt
aatatttgcggccttcgggtattatttgattgccccttggacctttccgggctctcgata
ttctccccaattggttttgatgaggaagaatataaagttagttcgtgtaacgagcttagg
gaatctgagtgtttggatagaaagaggcagaaagtcgagaaaccccttgatgcaagtaat
ttgatacattctgaaccatattataaaacagtcaatgatttgcatttgtggaatgcttcg
ttcatagatgttgtggtgatttcgagttatatgggtatgcttggtttgccgtttcttact
cgacaaaaaggattttctgccaagatttatgcaactgaagcaacagcaagacttggaaag
ctgatgatggaggatctagttgcaatgcatgcagaatttaggcagttatatggacctggg
gagtctggttgcacacagtggatgaaatgggaagaacttgacatgctttcatctgtaata
aaagacattgtcatcggcaaagatgggacagagctaggtagttggatgccattgtacagt
gcagcagacgtgatggattgcatgcagaaggttcaggctcttaagtatgcggaagaggcc
tgctataatgggacattgctcataatggcattgagctctggtttggaaattggcacatgt
aattggaccatatgcggcccaaaaggaactgtatcttacctttcaagctcttgctttgtc
tcttcaacgtcaatggattttgattatcatggttttcaaggaagtgatatgattatctat
tctgattttaccacttggaaaagtgggaacgatgttgatgattacagtagttactcagct
ccatctacttccaagctttcagatttcagcgaggatgattggaaagtgagagctgaatcc
ttgctgaaactagacgaaggcgaagaggaggtagagaaattgagttttctatgcacgtgt
tgcatcgattctatcaaatctggaggttctgtcgtcatacccataggacgtctcggaatc
atcctgcagcttcttgagcagatagcagattccctagaggcatcaaatataaaggcccca
atatttgttatatcttatgtagcagacgagttattggcatacaccaatatcattccagaa
tggttatgcaagcaacggcaagaaaggatgtattccggtcaatctctctttggtcatgtt
gatcttctgaagaataaaaggcttcgactctttcctactcttcattcacttgagttacta
aagagttgggaggaaccatgcgtagtcttttgtcctcattggagtatgcgacttggccct
gctgttcacttgcttcggcggtggtgtggggacccaaactctttactaattatggaggat
ggagaagatactgaattggcattcttacctttcaaacctatgacaataaaggtccttcaa
tgttcttttctctccggaataaagttgcagaatattcaacctttgttagatatattgcag
ccaaaagttcttatgatccctgaaaattcaaggcaatatataccaacattcaacacatct
atttcattgaaatatttccctgaaaaggaaacgttgtgcataccaaaagtgaagactgcc
tccgaattaaacattgctgcagacttgactatgcaaatcctatcgaagaatttgaaacat
aaagaaacaagtatagcaagattgaagggaagccttttgttggagcatggcaagcaacat
ctaatatttcagaagaatcaagaagcttcttcgcagaccaagtcattgctgcactggggc
aagcttgatcctaaagatcttttagtgtcattgcagaaaatgggcataaatggatatgta
gagcaagaaaacagtgacactgaatcagaaagtctcactatcatgcatatatcagagccg
aggaaagcattgatagagatgaaagggacaaatacagttattagcactgatgatgaagat
atgacggccctgatatgcgaagccataagtagcaatttggattgtatctga
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