Daucus carota (carrot): 108214559
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Entry
108214559 CDS
T05350
Name
(RefSeq) KH domain-containing protein At4g18375
KO
K21444
poly(rC)-binding protein 3/4
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108214559
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
108214559
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
KH_5
Motif
Other DBs
NCBI-GeneID:
108214559
NCBI-ProteinID:
XP_017242111
UniProt:
A0AAF0WP97
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All DBs
Position
3:complement(47074304..47081108)
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AA seq
548 aa
AA seq
DB search
MAGQRNSYGKRSHSHSDYSDDGRNKRRNSGPERESFAIGAEDTVYRYLCPGRKIGSIIGR
GGEIVKKIRAESKSKIRIGETVSGCDERVVTIYSPSDETNDFDGTDDRVCPSHDALFMVH
DRIVADDLSDDPEEEPQVTVRLLVPSDQIGCVIGKGGQIVQSIRSDTGAQIRIMKDDHLP
PCALASDELVQISGKGAVVRKALFQIAARLHDNPSRSQHMLISAKPPNAYESGGSVMGPT
GGGPIMGLAPVMGSYGGYKGENGRWSGSLYSAPRDEPSSKEFSLHLVCPTANIGGVIGKG
GSIINQIRKDSGATIKVDSSSAEDNDCIVSISAKEFLENTFSPTIEAALRLQPSCSEKVE
RDSGLISFTTRLLVPTSRIGCLIGKSGSIITEMRNTTKANIRILSKDDVPKVASEDDEMV
QISGDLDVAKDALLQVTSRLRGNLFDREGPVSAFVPVLPYLPMAVDHSDGMKYESRDSRR
YGREHSYSSGYGGPGDLPTSDLYGTYGGLHSGSGGSAYGGYGGYSSGRTGSSGYSGQSSA
PRRRSYGH
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggctggtcagaggaacagttacggaaagcgttctcattcacattcggattattctgat
gatgggagaaataaaaggagaaattctggcccggaaagggagtcatttgctatcggggca
gaagatacagtttatcggtatttgtgcccgggaaggaagattggaagcattatagggagg
ggaggagaaattgtcaagaagatacgagctgaaagtaaatcgaaaataagaattggtgaa
actgtgtcgggatgtgacgaacgtgttgtgacaatatacagcccaagtgatgaaacaaat
gattttgatggtactgatgaccgtgtctgtccatcgcatgatgctctcttcatggtacat
gacagaatagttgctgatgatttgtctgatgatcctgaagaagagccacaagttactgtc
cggctcctagtaccgtctgatcagattggatgtgttattgggaaaggaggacagatagtt
cagagcatccgcagtgatactggtgcacagattcgcattatgaaggatgatcatctaccc
ccttgtgcgctggcctctgatgaactcgtgcagatatctggaaaaggtgctgttgttagg
aaggctctttttcaaattgcagctcgtcttcatgataatccatcgcgctcccagcatatg
cttatttctgccaagccgccaaatgcttatgagtccggaggttcggttatgggtcctaca
ggtggtggcccaatcatggggttggctcctgtaatgggttcttatggtggatataaaggt
gagaatggacgctggtcgggttccctctactcagctccaagagatgagccatcttcaaag
gaattctctctacatttagtctgtcctactgcaaacatcggtggtgtaatcggaaaaggt
ggatccataattaatcagattagaaaagattctggcgccactataaaagttgatagttct
tctgctgaggacaatgattgcatcgtatcaatttctgcaaaagagtttttggagaacaca
ttctctccaacaatcgaagcagcattgcgactgcaaccaagctgtagtgagaaagttgaa
agagattctggtctaatttcattcacaactcgtcttcttgtgccaacttctcgaattgga
tgccttattgggaaatctggaagtataattactgaaatgaggaataccactaaagctaat
attcgcattctttcaaaggatgatgttccgaaagttgcatctgaggatgatgagatggtt
cagatatctggagatcttgatgttgcaaaggatgctcttttacaagtaacctcaaggttg
aggggaaacctctttgatagggaaggtcctgtatctgcttttgtgccagttcttccctac
cttcctatggcagttgatcattcagacggcatgaaatacgaaagtagagatagtagaaga
tatggccgtgaacattcatattctagtggttatggtggccctggtgatcttccaactagt
gatttgtatggaacttatggaggtttgcacagtggcagcggcggcagtgcttacggaggc
tatggtggctattcttcagggcgtactggtagctctgggtactcggggcaaagctctgct
ccacggcgtaggagttacggtcactaa
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