Daucus carota (carrot): 108214597
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Entry
108214597 CDS
T05350
Name
(RefSeq) protein NEDD1
KO
K16547
protein NEDD1
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dcr03036
]
108214597
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dcr04812
]
108214597
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
108214597
Microtubules and associated factors
gamma-tubulin ring complex
108214597
Cytoskeleton proteins [BR:
dcr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
108214597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
Beta-prop_RIG_2nd
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
WD40_RFWD3
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_HPS5
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_DCAF12
NYD-SP28_assoc
Motif
Other DBs
NCBI-GeneID:
108214597
NCBI-ProteinID:
XP_017242181
UniProt:
A0AAF0WTS9
LinkDB
All DBs
Position
3:complement(54297862..54306465)
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AA seq
792 aa
AA seq
DB search
MNDPAMLLAASAGDTVKLFDVSAESGDRCSLSYSPSPGFQVNSVKWNHTNLVVASAGDDK
KISLWRRNGQSMGTIPLAGNEGSDNIEESISSISFSNKGSRYICSGGSGQVVRIWDLQRK
RCIKWLRGHTDTITGAMYNCKDEHLASISLGGDVIIHNLASAARATELKDPNGQVLRVLD
YSRISRHLLVTAGDDGSIHLWDSTVRSPKVSWLKQHSAPTAGVSFSPTNDKVIASIGLDK
KLYTLDSGSRRPVSCIPYEAPFSSLAFRDDGNILAAGTSGGRVVFYDVRGKPQPFTVLRA
YGNSEAVTSMCWQRSKPVIVNEHNSTADTALLGVSVDDSVLMPDPLPSMSSSNHLLSSTL
SGSRILGRPGPSPESSSSVGSFGSMSSTLNFPSTDESPLRSSLWAGGALGRLKATRSYNL
KDEMDLFSPLQEVKPITPTLDKLWDDNLGTRKNYDRKSSLAFPSSIRFPLPEEGNSDLHP
ISEWKSGSGLNSKQDDDHSSFSQLISTPTSSMSGDSSSITPPEAWGGERLSDKFNHARQS
VTAFPSRFATLSSTSMSSGSMFSGLQDLSLSSSQMSTSSLVDAQLGLANLRTKEITSNQD
ANVGLSEHVPFNFTSLSQTAKGIPGQANLESLPPRRFSSYAERISTTPSFSEGASMSVGS
PKIKKTGTETREELVSSMLYRSDVSFAAEAGNIPSLNGGITQTQKPIPQSESQQGSSFTL
QLFQRTLEETLASFQKSIHEDMRNLHIEIIRQFHMQEMETSSVMNSILENQAELMKEVQS
LRKETQQLRNLL
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatccggcgatgttactcgccgccagcgccggcgacaccgtcaagctcttcgat
gtgtccgccgagtccggcgatcggtgttctttgagttactctccttctcctggatttcaa
gtcaattctgttaagtggaatcatactaatttggttgtggcgagtgcgggagacgataaa
aagatttcgctgtggcggagaaatggacagagtatggggacgattccgttggccggcaac
gaaggaagtgataatatcgaggagtctatttctagtattagctttagcaacaaaggatca
agatacatctgttctggggggagcggtcaggttgtaagaatatgggatttgcagagaaaa
cgctgtatcaaatggttaagaggacatactgataccataactggtgcaatgtacaattgc
aaagacgaacacctagcctctatcagtcttggcggggatgtcataatacacaaccttgct
tctgctgcaagagcaactgagctaaaggatcctaatggacaggttcttagggtgcttgat
tattctcggatcagccgtcaccttctggtgaccgctggtgatgatggatctattcatcta
tgggattcaactgttcgtagcccaaaggtttcttggctgaagcagcattctgcaccaact
gctggtgtcagtttctcaccaacaaatgataaggtaattgccagcattggtctggacaaa
aagctttacactttagattcagggagccggagaccagtgtcttgcattccttatgaggca
cctttctcgtcattggcttttagagacgatggaaacatattggcagctggaacaagcggt
gggagagtggtattttatgatgtccgtggaaagccacaacctttcactgttcttcgtgct
tatggaaattctgaggcagtcacaagtatgtgttggcaaagatcaaaaccggtgattgtt
aacgaacataatagcactgcggacactgctcttctgggagtttctgtagatgattctgta
cttatgcctgacccgcttccttctatgtcatcttcaaaccatttattatcctcaacatta
tcaggatctcggattttgggtcgtccaggtccctctccagaatcatcatcctcagtagga
agttttgggtctatgtcgagcactttaaatttcccttccacagacgaatcaccacttcga
agtagtttatgggccggtggagctctaggtagattaaaagcaactcgctcttacaactta
aaggatgaaatggatctattctccccacttcaggaagtcaagcccattacaccaactctt
gataagctctgggatgacaacttgggaactaggaaaaattatgataggaaatcttctctg
gcatttccttcatcaataagatttcctttgccggaggaagggaatagtgatcttcatccg
atttcagagtggaaatctggttctggtttaaattccaagcaggacgacgaccattcttcc
ttttcacagttgatatccactcctacatcttcgatgagtggtgactcttcctccataact
cctcctgaagcttggggtggtgagagattgtctgataaattcaatcatgcacgtcagtca
gttacagcctttccttctagatttgcaacactctcgtctactagtatgtcctcgggatca
atgttttctggattgcaagatcttagtctgtcttcaagccagatgagtacgagttctcta
gtagatgcacaacttggcttggcaaatttacggacaaaggagatcacttcaaatcaagac
gccaatgtaggattatctgagcatgttcccttcaattttacatctctttcccaaactgca
aaaggaattccagggcaggctaaccttgaaagtcttcctccaagaagattctcaagttat
gccgagagaattagcaccactccatcattcagtgagggtgcatcaatgtctgtgggttca
cctaaaatcaagaaaacagggactgaaactagagaagaacttgtgagtagcatgttgtac
agatctgatgtttcatttgctgctgaagctggaaatattccgtccctaaatggtggaatt
acacaaacccaaaaacctataccacagtctgagtcgcagcaggggagttcctttacccta
caactatttcaacgcactctagaagaaactcttgcttccttccagaaatcaattcacgaa
gatatgagaaatcttcatatagaaattataagacagttccacatgcaggagatggagaca
agtagcgtaatgaactcaatcctggaaaaccaagcagaactgatgaaagaagttcaatca
ctacgcaaagaaacacagcagcttcgcaatttattatga
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