Daucus carota (carrot): 108214645 Help Entry 108214645         CDS       T05350                                  Name (RefSeq) protein PAT1 homolog   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism dcr  Daucus carota (carrot) Pathway dcr03018   RNA degradation Brite KEGG Orthology (KO) [BR:dcr00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     108214645  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:dcr03019]     108214645 Messenger RNA biogenesis [BR:dcr03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      108214645   mRNA degradation factors    5'-3' decay     Decapping complex      108214645 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PAT1 Motif Other DBs NCBI-GeneID:  108214645 NCBI-ProteinID:  XP_017242258 UniProt:  A0A162AGV9 LinkDB All DBs Position 3:9392059..9399499 Genome browser AA seq 794 aa AA seqDB search MDGFDDDSNSQPIESNSTVFDASQYAFFGKDVVEEVELGGLEDDDENEFVPGLEFGSEAH QLIEEGSTLGSLPEVDDLAATFSELNKTVNAPRSAGGLGNWGSRGSSSAEWVQEAEPPNW YNQHEVDTESAQESKRWPSQLQSSYAPPEEPYLLHRTASYPEQQHQQQHIIQQHHFSSEP ILVPKSSFTSYPPPGGRSLQPAPNQQPHYSNISHLPGGNQYPVNAPSHPPFSNSQMQYTG SPHGSPLGGGLSQFAPPGLPVNSRPPNQWINRTGIYSGDNISLSNNLLHQQLPNQNGLMP PQLLQQTQHQRMHHQFQPTFGHVSGLQPQLINRHLSPAQPLMNNFKMLGSADMRDQRPRL FPKGRQGIPYLNQGFDASSQWNDGGWPQYRAKYMTSDEIENIMRLQLAATHSNDPYVDDY YHQACLAKKTGGVKSRHHFCPSNLKDFASRARANSEPHAFLKVDALGRVSFSSIRRPRPL LEVDPSNSSGGEENEQKGLVKPLEQEPMLAARVTIEDGLSLLLDVDDIDRFLKFNELQDV LQLRSRREVLLEALASSLQLVDPLGKHGHTVNMAPEDDLVFLGIVSLPKGRKLLSRYLQL LFSSADLMRVVCMAIFRHLRFLFGALPSDPSTAETTIKLVKTVSSSVRGMDLRALGACLA SVVCSAEHPPLRPLGSSAGDGASVILISALERATEILRDPHTAVNCSMPNRVFWQASFDV FFNLLTKYCISKYDTTVQSLLAQGLTDMSAIGSDATKAISREMPVELLRASLPHTNEQQR KVLLDFAQRSMPTL NT seq 2385 nt NT seq  +upstreamnt  +downstreamnt atggatggatttgatgatgattctaattctcagccgattgaatcgaattctactgtgttt gatgcgtcccagtatgcattctttgggaaagatgttgttgaggaagtggagttaggagga ctagaagatgatgatgaaaatgagtttgttccgggactcgaatttggtagtgaagctcat cagttgatagaagagggtagcacattagggtctttgcccgaggttgatgatcttgccgct acattttcagagttaaacaagacggtcaatgctccaagaagtgcaggtggtcttggaaac tggggatccagaggaagttcatctgctgagtgggtacaagaagcagagccacctaactgg tataatcagcatgaggttgacacagaaagtgctcaagaaagcaaaagatggccatcacag ctgcagtcttcctatgctccacctgaggagccatatttgttgcacagaacagcatcatat cctgaacagcagcatcagcagcagcatattattcagcagcatcacttttccagtgaacct attcttgttccaaaatcatcttttacttcttatcctcctcctggaggcagatctctgcag cctgcacccaaccagcagccacactattctaatatttctcatcttccaggcgggaatcaa tatccagttaatgcacccagtcatcctcccttttctaattcccagatgcaatatactgga tcacctcatgggtctcctttgggtggaggtttgtctcagtttgcgccacctggtcttcct gtaaacagtcgaccaccaaatcaatggataaaccgtacgggtatatattcaggagataat atcagcctctccaacaatctcttgcatcaacagttacctaatcagaatggcttaatgcct ccacagttgctgcagcagacgcaacatcaaagaatgcaccatcagtttcagcccacattt ggccatgtatcaggactgcagccacagcttattaatcggcatctttctcctgctcaacct ttgatgaacaactttaaaatgcttggatcggctgatatgagagatcaaagacctaggttg tttccaaaaggtaggcaaggcatcccgtatttaaaccagggttttgatgcaagcagccaa tggaatgatggtggatggccacagtacagagccaagtatatgacatctgatgaaattgag aacatcatgagattgcagcttgctgctacacatagtaatgacccgtatgttgatgactat taccatcaagcttgtctagctaagaaaactggtggtgtaaagtcaagacaccatttctgc ccaagcaaccttaaggattttgcttcccgtgctcgagctaattccgagccacacgccttt ctcaaggttgacgctcttgggcgagtttccttctcttcaattcgcagaccccgtccactt cttgaagttgacccatcaaattcatcaggcggcgaggaaaatgaacaaaaaggattggtg aagccgttggaacaggaaccgatgcttgcggccagagtaactattgaagatggcctttct cttcttcttgacgttgatgatattgacaggttcctgaagtttaatgaacttcaagatgtg ttgcagctaaggagccgtcgagaggttttgcttgaggctctggcatcttcacttcaactt gttgaccctcttggcaaacatgggcacactgttaatatggctcctgaagatgaccttgtt tttcttggcatagtctctcttcccaaaggtcgaaagctcttatcgaggtaccttcagctt ctcttttctagtgctgacctcatgcgagtggtctgtatggctatattccgccatttaagg ttcttgtttggggcccttccatctgacccctcaactgctgaaacgactatcaagcttgta aagactgtttcatctagtgttcgtggaatggaccttagagcactcggggcctgtcttgct tctgttgtctgctctgctgagcatccacctctcagaccccttgggagctctgctggagat ggtgcttctgttattctaatatctgcacttgaaagggctactgaaatcctaagagatccc catactgctgtaaactgcagcatgcctaatcgagtattttggcaggcttcttttgatgtg tttttcaaccttctcacaaagtactgcatcagcaagtatgacactactgtgcagtctctg cttgcacagggcctaacagacatgtctgctataggttcagacgcaacaaaagctattagt agggaaatgccagtagaattattacgagcaagtcttcctcatacaaatgaacagcaaagg aaggtcttattggactttgcacagcgttcaatgcctacactttga

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