KEGG   Daucus carota (carrot): 108214805
Entry
108214805         CDS       T05350                                 
Name
(RefSeq) glycine-rich RNA-binding protein 4, mitochondrial
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
dcr  Daucus carota (carrot)
Pathway
dcr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108214805
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dcr03019]
    108214805
   03041 Spliceosome [BR:dcr03041]
    108214805
Messenger RNA biogenesis [BR:dcr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     108214805
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     108214805
Spliceosome [BR:dcr03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    108214805
SSDB
Motif
Pfam: RRM_1 RRM_7 RBD_DEAH11
Other DBs
NCBI-GeneID: 108214805
NCBI-ProteinID: XP_017242494
UniProt: A0AAF0WPN1
LinkDB
Position
3:15888251..15890925
AA seq 266 aa
MAFFNKAGSILRQAACSKNIGRDISASGSSIFQTIRCMSTKLFIGGLSYGTDEYSLREAF
EKYGAVTEAKIISDRESGRSRGFGFVTYSTPEEANSAIQAFDNQDFQGRTIRVNFATERA
RSPGGGYGGGGYGGGGGYGGGGGYGGGNYGGGGGNYGGGGGNYGGGGGYGRGGGGGYGGG
GGGYSGGGGSGAYGSSGGSDFGFENDSQNTNVGVTSTDFASGSATSGIDTDASSGVGGSA
GGYNPGFPEDFKNDNDEPDDFASRKA
NT seq 801 nt   +upstreamnt  +downstreamnt
atggctttcttcaataaggctgggagtatattaaggcaagctgcgtgtagtaagaacatt
ggtcgtgatatttcagcatctggctcttcaatatttcaaacaataagatgcatgtcaaca
aaactcttcattggagggctctcgtatggcactgatgagtatagtttgagagaagcattt
gaaaagtatggtgctgtcactgaagcaaaaataatatctgacagagagagtggcagatca
agaggatttggttttgtaacctacagcactcctgaggaggcgaacagtgctatacaagcg
tttgataaccaggattttcaaggccggactataagggtgaattttgctactgagagggca
cgaagtccaggcggtggttatggtggtggtggatatggcggcggcggcggttatggtggg
ggcggtggttatggtggtggcaactatggcggcggtggcggaaactatggtggtggtggc
ggaaactatggtggaggcggtggttatgggagaggaggtggcggcggctatggtggtggt
ggtggtggctatagtggcggtgggggaagtggtgcttatggaagcagtggtggcagtgat
tttggctttgaaaatgacagtcagaacaccaatgtaggtgttaccagcactgattttgcc
agcggtagcgccactagtggcattgatactgatgcaagcagtggtgttggtggtagcgca
gggggatataaccctggctttcctgaggattttaagaatgataatgatgagcctgatgat
ttcgcaagtagaaaggcataa

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