KEGG   Daucus carota (carrot): 108214971
Entry
108214971         CDS       T05350                                 
Name
(RefSeq) histone deacetylase 5
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
dcr  Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dcr03036]
    108214971
Enzymes [BR:dcr01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     108214971
Chromosome and associated proteins [BR:dcr03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     108214971
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 108214971
NCBI-ProteinID: XP_017242742
LinkDB
Position
3:37500809..37511309
AA seq 649 aa
MESGSGRRRVGLVYDERMCKHFNPYYHPENPSRIRSIWDKLQSAGIHNRCVIVDAKEADD
KYLALVHSEKHIDLIKNISSKKLASQRNRIATRFNSIYFNEGSSEAAYLAAGSVIEVAEK
VVKGELNSAFAIVRPPGHHAEEHQPMGFCLYNNVGITTRFLLDTKPELGIKKILIVDWDV
HHGNGTQKMFWKDPRVLFFSVHRHEFGNFYPAGDDGSYIMTGEGPGAGFNINVPWENARC
GDADYLAVWDHILIPVAKEFNPDLVIVSAGFDAAIDDPLGGCCVTPSGFSVMLEKLMGFA
GGRIVMALEGGYNLNSIANSVLACVEVLLEEKNITRTLKDYPFDSTWGVINLVRKELSPY
WPILAEKLPEKLNSRKAPQVQFQSSDSEDEYDDDLRRVLSVENEKVVEDVIEPLLKLKVN
EQVLDNLSSAPPPWRSKLSQVDVWYATFGSNMSISRFLCYIEGGQTEGMRKKCSGSMDTR
HPKETVWKTVPHRLFFGHDCTSTWGPGGVAFLHPRSTEGDETHMCLYKITLEQFNDVLLQ
ENTSSIDTTSPLFDISDLHTITDNQFFPVEALKTGWYHNVVYLGKEKDIPILTMTCPVSD
IELFKTGKLPLCEPCEEYANTLVKGLTESKRLSKEEAISYIKEASSKAL
NT seq 1950 nt   +upstreamnt  +downstreamnt
atggaaagcgggtcgggtcggcgtcgggtgggcttagtttatgatgagaggatgtgcaag
cattttaacccctactaccatcctgagaacccctccaggatccgctccatttgggacaag
cttcagtctgctgggattcataacagatgcgtgattgtagatgcaaaagaagcagatgat
aagtacttggctttggttcactccgagaagcacattgatttgatcaagaatattagctcc
aaaaaactggcttcccaaagaaacaggattgctacaagatttaattcaatctattttaat
gaaggttcatcagaagctgcatatctagctgcaggctctgtcattgaggttgctgaaaaa
gttgtcaagggtgaattgaactctgcctttgccatagttagacctcctggacatcacgca
gaagaacatcagcctatgggattttgcttatacaataatgtgggaatcacaacaaggttc
ttgttggatacaaagccggagttgggaattaagaaaatattgattgtcgattgggatgtt
catcatggaaacgggactcaaaaaatgttttggaaggatcctcgagtgctatttttctcc
gtgcaccggcacgagtttgggaacttctatccagctggagatgatggctcttatataatg
acaggagaaggtccaggtgctggattcaatattaacgttccctgggagaatgctcggtgt
ggggatgctgactatttggcagtttgggatcatatactgattccagtagccaaggaattt
aatcctgacctggttatagtctctgcaggatttgatgctgccatcgatgatcctcttggt
ggatgttgtgttacaccatccggcttttctgtcatgttggaaaagttaatgggatttgct
gggggaaggattgtcatggcactagaaggaggatacaaccttaattcaatagcaaattct
gtacttgcttgtgtagaggtgctgctagaggagaaaaatatcactagaactctcaaggat
tatccattcgactcgacatggggagtgataaacttggttcgtaaggaattatctccatac
tggccaatacttgctgagaaattgcctgaaaaattgaacagcaggaaagcacctcaagtt
cagtttcaaagctctgactccgaagatgagtatgatgatgatttgcgtagagtattgtcg
gtggaaaatgaaaaagttgttgaggatgtcattgaacccctgctgaagctcaaagttaat
gagcaagttctagataatttgagctctgctcctcctccttggagatcaaagctttcacag
gttgatgtctggtatgctacatttggatccaacatgagcatatcaaggttcctctgctat
attgaaggtggacagactgaaggcatgcgaaagaaatgttcaggatcgatggacacaagg
cacccaaaagaaactgtgtggaagactgtcccacaccgtttattctttggtcatgattgt
actagtacttggggccctggaggagttgcttttctacaccctagaagcactgaaggcgat
gaaactcatatgtgtttgtataaaattacgcttgagcagttcaatgatgttttgcttcaa
gagaacacttcaagcattgacacaacttcccctctatttgatataagtgatttgcataca
attacagacaaccagttctttcctgtggaagcactaaagacgggctggtaccataatgta
gtttacttggggaaggaaaaagatattccaatacttacaatgacgtgccctgtttctgac
atagagctctttaaaactgggaagcttccactttgtgaaccttgcgaagaatatgcaaat
acattggttaaagggctgacagaaagtaagcggctctctaaggaggaagccatttcttat
attaaggaagcttcttccaaagcattgtaa

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