Daucus carota (carrot): 108215026
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Entry
108215026 CDS
T05350
Name
(RefSeq) serine/threonine-protein kinase ATG1c
KO
K08269
serine/threonine-protein kinase ULK2 [EC:
2.7.11.1
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
108215026
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
dcr01001
]
108215026
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108215026
03029 Mitochondrial biogenesis [BR:
dcr03029
]
108215026
Enzymes [BR:
dcr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
108215026
Protein kinases [BR:
dcr01001
]
Serine/threonine kinases: Other
ULK family [OT]
108215026
Membrane trafficking [BR:
dcr04131
]
Autophagy
Autophagosome formation proteins
Atg1 complex
108215026
Mitochondrial biogenesis [BR:
dcr03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
108215026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
MIT_ATG1
ATG1-like_MIT2
Motif
Other DBs
NCBI-GeneID:
108215026
NCBI-ProteinID:
XP_017242828
UniProt:
A0A166C762
LinkDB
All DBs
Position
3:58675498..58684241
Genome browser
AA seq
723 aa
AA seq
DB search
MGQSNKSVRVIGDYLVGKQIGSGSFSVVWHGKHRVNHTEVAIKEIVTGRLTKKLEESLLS
EIRILRHINHPNIIHLYDMIQEPGKIYFVLEFCKGGDLSMFLHKRKGRITESTAKHFMLQ
LASGLKILRDNDLIHRDLKPQNLLLSTPGDDSVLKIADFGFARSLEPRNLAETLCGSPLY
MAPEIMQLQKYDAKADLWSVGAILFQLVTGRTPFTGNNQIQLLQNIMRSTELAFPPHTTG
LSLECIDLCRKLLRPNPVERLTFEEFFNHPFLSQKLSDKSLRSLTSVGKGDFPTNKTNPD
LRTNKNSKDQLPSSPEDKPTGPERSLTHINKSPLRSTYGFSVDTRAEKKNVQNFSSNTDL
SIKDTCDRQKPELLAYNFSNSNPSEGNIEKSLKTVDHQTVIVPSTVLDSFELIAQEYVMV
SNPPLDMSSSDCASELNHVPSKVKHPLLGGNINLKPNIPVTIIAATTNESCHGNMGNHGS
APSGTSIGSFCVRESSGLPSTDYVSRIKLLQNCASTITQLVHEKVESGKHLEAFSVQLVI
LAIWKQALHICHTQAASAIEGSPTQETVRELASNDHATPNSREHLISANWQNPQDVYSHI
EGAFLLEVGNAEELAKLIEPGNQEMPDAMETIYQSALDSGRHGAVHEFNGNTEDAAEFYS
KALCLLNFLLLEGPSLIINHPFSLTNSDRYRLQTYIDVLNNRQNHSRSQRMVLLNCEDQQ
SPP
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgggtcagtccaacaagagtgttagagtgatcggggattatttggtgggcaagcaaatc
gggtcgggttcattttcagttgtgtggcatgggaagcatagagttaatcatacagaagtt
gcaatcaaagagattgttactgggagattaaccaagaaattggaggagagtttgttgtcg
gaaattcggatattgagacatattaatcatcctaatatcattcacttgtatgacatgatt
caggaaccaggaaagatatactttgtgttggaattttgcaaagggggtgatctttcgatg
tttcttcacaaacgtaaaggaagaatcacggaatctactgcaaagcacttcatgctgcag
ctcgcatcgggacttaaaatccttcgagacaatgatctcatacatcgagacttaaagccg
cagaatctacttctatcaactcctggcgacgactcagttttaaagattgcagattttggt
tttgcaagatctttagaaccgagaaaccttgctgaaacactctgtggatcgcccttgtat
atggctccagaaataatgcagctgcagaaatatgatgcaaaggctgatctctggagtgtt
ggtgcaattttatttcagcttgtaactgggagaactccttttacaggaaacaatcagata
cagttgctccagaatataatgaggtcgactgaattggcttttcctccacatacaacgggt
ttgagcctcgaatgcatagatttgtgccgaaagttgttgcggcccaatccagtggaaagg
ctgacttttgaggagttctttaaccatccatttctttctcagaaactgtctgataaatca
ttgagaagtttaacatcagtgggaaaaggtgacttccccacaaacaagaccaatcctgac
ttaagaacaaacaaaaattccaaagatcagttgccttctagtccagaagataaacccact
ggtcctgaaagaagtctaacccacatcaacaagtctcctttaagatctacttatggattt
tctgtggatacaagagccgagaagaaaaatgtgcagaacttttcaagcaacacggatctg
tctattaaggatacttgtgatagacaaaaaccggagcttctggcttataacttcagcaac
agtaatccatctgaaggaaacatagagaaatctctgaaaacagtggaccatcaaacagta
attgttccttcaacagttctggattcattcgagttaattgctcaggaatatgttatggtc
tctaatccgcctctggacatgtcatcgtcagattgtgcctcagagcttaaccatgtacca
tccaaagtaaagcaccctcttcttggtgggaatattaacttgaaaccaaatatccctgta
accattattgcagctaccactaatgaaagctgccatggtaacatgggaaaccatggttct
gctccatctgggacttcaataggttccttctgtgtcagggaatcttcaggtctgccatct
acagattacgtttcaagaattaagttgctgcagaactgtgcatcgaccattacacaatta
gtgcatgagaaggttgaatctggaaagcatttagaagcattctcagtacagcttgtaatt
ctagcaatatggaagcaagcgcttcatatttgccatacacaagctgcatcagctatagaa
gggagtccaacccaagaaaccgtgagagaacttgctagcaacgatcatgctactcctaat
agccgagaacatcttatttctgctaactggcaaaatccacaagatgtttactctcatatt
gaaggggcatttctccttgaagttgggaacgcggaggaacttgccaagcttattgagcct
ggaaaccaggagatgccagatgcaatggaaacgatatatcagtcggcccttgattcgggc
agacatggggctgtccacgagttcaacggcaacactgaagatgcagcagaattttattca
aaagcactgtgcttgttaaattttcttctactcgagggtccctcactcattataaaccat
cctttttctctcacaaactcggaccgttataggctgcaaacatatattgatgtcctaaac
aaccggcaaaaccattcaaggtctcaaaggatggttcttcttaattgtgaagatcaacaa
tccccgccttaa
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