Daucus carota (carrot): 108215074
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Entry
108215074 CDS
T05350
Name
(RefSeq) cyclic nucleotide-gated ion channel 4 isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
108215074
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dcr04040
]
108215074
Ion channels [BR:
dcr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
108215074
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Motif
Pfam:
cNMP_binding
Ion_trans
Gsf2
Motif
Other DBs
NCBI-GeneID:
108215074
NCBI-ProteinID:
XP_017242897
UniProt:
A0A162AHQ2
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Position
3:13128841..13133895
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AA seq
663 aa
AA seq
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MATLQQETSHFSDEDDDTTSNDEDDGIEEESSERDLKTRKGRGKIWFLGKVLDPRASWIQ
EWNQVFLLVCATGLFVDPLFFYALSISEACMCLFIDGWFAITVTVLRSMTDTLHLWNMWL
QLKINKRPHAVNADERSRPYDVSSRTVAMRYLVAKKGFFFDLFVILPIPQVVLWIVIPAL
LEKGSTTEVMTVFLVMFLIQYLPKIYHSVYLLRRMQNLSGYIFGTVWWGIALNLIAYFVA
SHAVGACWYLLGIQRATKCLTEQCMKSQISCVPKYLACENNIFYGGGNLAKDSRRLLWGE
NQKARSVCLLADDKFGYGAYKWTVQLVINESLLEKILYPIFWGLMTLSTFGNLESTTEWL
EIVFIIIVLTTGLLLVTMLIGNIKVFLHATTSKKQAMQLKMRNVEWWMRKRHLPQEYRQR
VRNYERQRWAAMRGVDECDMIRNLPEGLRRDIKYHLCLDLVKQVPLFQHMDSLVLENICD
RVKSLIFTKGETITREGDPVQRMLFIVRGHLQSSQVLRDGVKSFCMLGPGNFSGDELLSW
CLRRPFVERLPPSSSSLVTLETTEAFGLEAEDVKYVTQHFRYTFVNEKVKRSARYYSPGW
RTWASVAIQLAWRRYRHRLTLSSLSFIRPRRPLSRCSSLGEDRLRLYAALLTSPKPNHDD
FDF
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggctactctgcagcaagaaacttcacacttttcggatgaggacgatgacactaccagc
aacgatgaagacgatggtatcgaagaagaaagctcagagcgagatctcaagaccagaaag
ggccggggtaaaatatggttcttaggcaaagtactggaccctagagcttcatggatccag
gaatggaaccaagtgtttcttttagtttgtgccacaggattatttgtggatccactcttc
ttttacgcactttcgataagtgaggcctgcatgtgcttgttcattgatgggtggttcgcc
atcaccgtcacggttctcaggtctatgacggatactctgcacttgtggaacatgtggttg
cagttgaagataaacaaacgtcctcatgctgtcaatgctgacgagaggagccggccgtac
gatgtcagctcgcgcacggtggcgatgcggtatttggtggcgaagaagggtttcttcttt
gatctattcgtcatcctgccgattcctcaggttgtgttatggatagtaatcccagcttta
cttgaaaagggttccacaacagaagtgatgacagtcttcctcgtaatgtttctcatccag
tacttaccaaagatctaccactctgtttacctcttgcgccgaatgcaaaacctctctggc
tacatttttggtactgtctggtggggaatagcgctcaatttgattgcatattttgtcgcc
tctcatgcggtgggagcatgttggtatttacttggaatccagagggctacaaaatgcttg
acagaacaatgcatgaaatctcagattagttgtgtccctaaatacttggcttgtgaaaac
aatatcttttatggtggaggaaacctcgcgaaagacagcagacggctcttatggggagag
aaccaaaaggctaggtctgtgtgtctgttggctgatgataagtttggttatggtgcttat
aaatggactgtgcaacttgtgatcaacgaaagccttttggagaaaattctttatcctata
ttttggggtctcatgactctaagtacatttgggaatctggagagcacgacagaatggtta
gaaattgtgttcatcatcattgttcttacaactggactcctcctggtcaccatgttgatt
ggtaatattaaggtgtttttgcacgcgacgacatcaaagaaacaggcaatgcagttgaag
atgagaaatgttgagtggtggatgaggaagagacatctgccgcaggagtacaggcagaga
gtgcgcaactatgagaggcaacgttgggctgctatgcgtggcgttgatgaatgtgatatg
atcaggaatctccctgaaggtcttaggagggacatcaagtatcatctgtgcttggacttg
gtcaagcaggttcctttgtttcagcacatggatagtttggttctagagaacatttgtgat
cgcgtcaagtccctcatattcaccaaaggagaaaccataactagggaaggtgaccctgtt
cagagaatgttgtttatagttagagggcatttacaaagcagtcaagtactaagggatggt
gtaaaaagtttctgtatgttaggccctggtaacttcagcggtgacgagctcttgtcatgg
tgtcttaggaggccttttgttgaaagattgcctccgtcttcatcatcactagtcactctt
gaaacaacagaagcttttggacttgaggccgaagatgtgaagtacgtaacgcagcatttt
aggtacacatttgttaatgagaaagtgaagcggagtgcaagatattattcaccagggtgg
agaacttgggcgtctgttgctattcagctggcatggcgaaggtacaggcatcgactgaca
ctcagttctctgtcattcataaggccaaggaggcctttgtcgaggtgttcatcgcttggg
gaggataggctgaggctttatgctgctctgttaacatcgcctaagccaaatcatgatgat
tttgatttctga
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