Daucus carota (carrot): 108215126
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Entry
108215126 CDS
T05350
Name
(RefSeq) transcription initiation factor TFIID subunit 4b isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108215126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dcr03021
]
108215126
03036 Chromosome and associated proteins [BR:
dcr03036
]
108215126
Transcription machinery [BR:
dcr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
108215126
Coactivators
SAGA/TFTC/STAGA complex
108215126
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
108215126
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
DUF7680
Motif
Other DBs
NCBI-GeneID:
108215126
NCBI-ProteinID:
XP_017242966
LinkDB
All DBs
Position
3:complement(1954808..1961627)
Genome browser
AA seq
862 aa
AA seq
DB search
MDPSIMKLLEEDEDETMHSGADVEAFTAALNRDIEGDTSVKPLPSDSDNAALSQGSNHNP
GQLFPPWQASSQNENASQQVVNVSQQELHASISEVNQHGSATENQLQQQIDSKELNCIPM
QQKQSQDSFPQQQTEQKNPHVSQSSSVQNPDRITAVGQEPNKAQDPSSISQYLRSQKMNS
QQAAATSQANNALKNGKQVPFAMLFPVIEPLLDKDKAMQLRTIYNRLKKNEISKDGFVKH
MRSLVGDHMLKLAVVKLQEQAPRSSQVAPTQAASHSQVPAQQQHMTMQSVSGQQFSESHS
YSQINQKGLNSSVNPSGPSPVIRAPIVSSNTAMDNNAHILHDIKQERERPIAIQGLNKQQ
QQHMHFSQSSIPPYGTTTGSNYNQYAGGNMHSSMQSLKQQPQNMQARQVPIHPGVSTMQS
IGVPKYEKQNTFTEPMRVQGHYVKQEPIDPANEQQQKSQLSSSQGQSRAGFSTSTSIMQS
NAGLSSITTQMDPSNSLGARLASTTPSVGPGSIAKTPMKKAITGPKKPLESPASETLQPA
KKQKVFHSDQSIEQLNDVTAVSGVNLREEEEQLFSGTKEDSRVSEASRRVVQEEEERLFL
QKVPLQKKMTEIMNKWGVKSISNDVERCLSLSVEERLRALISNMVRLSKQRVSIEKARHR
TIVTLDVRQQIVAMNLKAREEWDKTQGDPEKGQGVNESEGNSGTDGDKDKDDTRARPAKA
NKEDDDKMRTTAANVAARAAVGGDDMLSKWQLMAEARQKREGGVDSASSSQPSREVNRKL
ASAPVRNARDNQDAEKRSQSATVATSGAMRKSGKTQSVSQTDILRSISVKDVIAALEREP
QTSKSTLIYRLYAKLHKDVTCE
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggacccttctataatgaagctgcttgaagaagatgaggatgaaactatgcattctggt
gctgatgtagaggcatttacagctgctttgaatagagatattgaaggggacacttctgtg
aagcctctcccttctgattctgataatgcagctttatctcaaggaagcaaccataaccca
ggccagttgtttccgccgtggcaagcttccagccaaaatgagaatgccagtcagcaagtt
gtaaatgtttcccaacaggagctacatgcttctataagcgaagtaaatcagcatggttct
gctacagagaatcagctacaacaacagatcgactcgaaggaattaaattgcattcccatg
caacagaaacagtctcaagacagttttccgcaacagcagactgaacagaagaatccacat
gtatcacaatcatcaagtgtccagaacccagacaggattactgctgttggtcaagaaccg
aataaagcacaggatccaagtagcatatctcagtaccttcggtcacagaagatgaatagt
caacaagctgcagcaacaagtcaggctaataatgctttgaaaaatggaaaacaagtacca
tttgccatgttatttccagttatagagccactacttgataaagacaaagccatgcaactt
agaactatctataatagactaaaaaaaaatgagatctccaaagatggctttgtaaagcac
atgagaagtctggtgggtgaccacatgctcaagctggcagttgtaaagctgcaggaacag
gctcctcgcagctcacaagttgcaccaacacaagctgcctcacactctcaggttcctgct
caacaacagcatatgacaatgcaatctgttagtggccaacagttttctgaatctcactcg
tattcccaaattaatcagaagggtctcaactcttcagtaaacccatctggtccctctccg
gtgatacgagcaccaattgtttcaagcaatacggcaatggataataatgcccatattttg
catgatataaaacaagaaagggagcgccccattgcaatacagggacttaataagcagcag
cagcaacacatgcacttttctcagtcctctattcccccttatggaactactacaggcagc
aattataaccaatatgctggaggaaatatgcatagctcaatgcaatctcttaaacagcag
cctcaaaatatgcaggcaaggcaagtcccaattcatccaggcgttagcacaatgcagtca
attggtgtgcccaagtatgagaagcagaacactttcactgaacccatgagagtgcaagga
cattatgtgaaacaagagccgatcgatccagcaaatgagcaacaacagaaatctcagctg
tcttcttcacaagggcaatctagggcaggcttctctacatcaaccagtattatgcagtca
aacgcaggactatcatctattacaacccagatggacccaagtaactcgttaggtgcccgg
ttagcatcaactacaccttcagttggacctggaagtatagctaaaacacccatgaagaag
gccattactggtccaaaaaaacctttagaatcgccagcttccgaaaccttgcagccagcg
aaaaaacaaaaggttttccattctgatcaaagtattgagcaactcaatgatgttactgct
gtcagtggagttaatctgcgggaagaggaagaacaactattttcgggtaccaaggaagac
agtagagtctcagaagcatctcgtagggttgtgcaagaagaagaagaaaggttgtttttg
cagaaagttccactccaaaagaaaatgacagaaatcatgaataaatggggggtgaagagt
ataagcaatgatgtggaacgatgcctgtcactgagtgtagaggaacgtttgcgtgcgctg
ataagtaatatggtgaggctatcgaaacagcgggttagtattgagaaggcaagacaccga
actatcgtcaccttggatgtacgccaacaaattgtagcaatgaacttgaaagctagggaa
gaatgggataagacacagggtgacccagaaaaaggtcagggtgtaaatgagtcagaaggc
aattctggaactgatggagataaggataaggatgacactcgtgcaagaccagctaaggcc
aacaaagaggatgatgacaagatgcgtacaacagctgcaaatgttgctgctcgagctgct
gtaggaggagatgacatgctgtcaaagtggcaattaatggctgaggccaggcagaaacgc
gaaggaggggttgattctgcttcatcttctcagccaagtagagaggtaaaccgcaagctt
gcatcagcccctgtaagaaatgctagagacaaccaagatgctgagaaaaggagtcaatca
gctactgttgctacatctggagcaatgaggaaatctggcaagactcagtccgtgtctcaa
acagacattctgcgtagtatatccgtcaaggatgtgatcgctgccctagaaagggagccc
cagacttctaagtctacattaatctatcgtctgtacgcgaagctgcataaagatgtcaca
tgtgaataa
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integrated database retrieval system
