Daucus carota (carrot): 108215139
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Entry
108215139 CDS
T05350
Name
(RefSeq) autophagy-related protein 18a
KO
K22991
WD repeat-containing protein 45
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108215139
Membrane trafficking [BR:
dcr04131
]
Autophagy
Other autophagy associated proteins
Others
108215139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
Beta-prop_RSE1_2nd
Beta-prop_Vps41
WDR55
Beta-prop_EML
Beta-prop_NUP159_NUP214
BCAS3_WD40
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
BACON_2
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
108215139
NCBI-ProteinID:
XP_017242989
UniProt:
A0A166I2Z0
LinkDB
All DBs
Position
1:43631533..43634590
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AA seq
378 aa
AA seq
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MFKTLPPSPNPNPNLSSMTPFSSSISTPSPPSSSAPPHIHHVSFNQDFTCFALATDRGLF
VYHCDTLKQAFRRHHNSSFDIVQMLFQSNVIACVGTVTHPGFSSNKLMIWDDRTSRYRGE
QCFRSQVIAVRLRNDRIVAVFSQKVQVYRYEDFKPIHVIETYPNDKGLCEVSYGAGNMVL
VCLALRKGEVRVEHYGLRKTKFIVPHNSSLACLALTTDGKLLATASIQGTLVRVYDTLDG
LLLQEVRRGAFMADIYSLAFSSTAQWLAVSSDKGTVHVFSLKVDSRSSSVTSAVSSLSFI
KGMLPKYFSSEWSVAQFRVPECSQYIVGFGQQENTVMIVGMDGSFYRCQFDPDSGGEMKQ
LEFRNVLKLQEEEEEESV
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaaaccctccctccctctccaaaccctaaccctaatctctcctccatgacaccc
ttctcctcctccatctccaccccctccccgccctcttcctccgctcccccacacatccac
cacgtcagcttcaaccaggacttcacctgcttcgccttggccaccgaccgcggcctcttc
gtctaccactgcgacaccctcaaacaagccttccgacgccaccacaactccagcttcgac
attgtccagatgctcttccagagcaacgtcatcgcctgcgtcggcaccgtcactcacccc
ggattttccagtaataagttgatgatttgggatgatcggacctctcggtacaggggcgag
cagtgtttcaggagccaggtcatcgcggtgaggctgaggaatgatagaatcgttgctgtt
ttctcgcagaaggtacaggtttatcggtacgaagatttcaagcctattcatgtgatcgag
acgtatccgaatgacaaggggctttgcgaagtgtcttatggggcggggaacatggttttg
gtttgtttggcgctcaggaaaggggaagttagagttgagcattatgggttgaggaagact
aagtttattgttccacataattcgagtctcgcgtgtcttgcgcttaccactgatgggaag
ttgcttgctacggcgagcattcaggggactttggttcgggtgtatgatactttggatggc
ttgttgcttcaggaggttaggagaggtgcattcatggctgatatttatagcctagctttc
tcctctactgctcagtggctagctgtgtcaagtgacaagggaacagtccatgttttcagt
ctaaaggttgattctagatcaagttcagttacatcagcagtttcaagtctgtcattcata
aaaggcatgctgccaaaatatttcagttcggagtggtcggtggctcagttccgtgtacct
gaatgctctcagtacattgttggctttggccagcaagagaacactgtaatgattgttggt
atggatggaagcttctatcgctgccagtttgatccagatagtggcggagagatgaaacaa
ctggagttccgcaacgtcttgaagttgcaagaagaagaagaagaagaaagtgtctga
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integrated database retrieval system