Daucus carota (carrot): 108215154
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Entry
108215154 CDS
T05350
Name
(RefSeq) autophagy-related protein 18a
KO
K22991
WD repeat-containing protein 45
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108215154
Membrane trafficking [BR:
dcr04131
]
Autophagy
Other autophagy associated proteins
Others
108215154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_Vps41
WDR55
Beta-prop_IFT140_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
BCAS3_WD40
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_HPS5
Ge1_WD40
EIF3I
Beta-prop_IFT122_2nd
Beta-prop_RSE1_2nd
RMC1_N
KNTC1_N
NBCH_WD40
Beta-prop_IFT80_2nd
DUF6849
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
108215154
NCBI-ProteinID:
XP_017243008
UniProt:
A0AAF0WST3
LinkDB
All DBs
Position
3:complement(61072441..61080159)
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AA seq
406 aa
AA seq
DB search
MTTLSPSPWPTPQPDGIESPPISNPNPNSTPQTPPSDVLDIPNPNSTNSDNLSPPNLLHV
TFNQDYGCFSSGTDRGFRIYNCDPFRELFRRDFDTGGGIGIVEMLFRCNILALVGGGADP
QYPINKVMIWDDHQSRCIGELTFRSEVRGVRLRRDSIVVVLEKKVLVYNFADLKLLHQIE
TFENPKGLCEVSQGSGSFVMVCFGLRKGEVRVEHYLTKRTKFVMAHDSRIACLKLSQDGT
LLATASTKGTLVRIFNTYDGTLLQEVRRGVDRAEIYSLAFSSTAQWLAVSSDKGTVHVFS
LKTNSVNEGTDNLDNNINPKLAVTSPGSPLSFIKGVLPKYFNSEWSVAQFRLIEGSQYIV
AFGHQKNTVVILGLDGSFYRCKFDPATNGEMTQLEYHNFLKPEEAF
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgactactctctccccatccccctggcccaccccccaacccgacggcatcgaatctccc
ccaatttcaaaccctaaccctaattccactccacagactcccccaagcgacgtcctcgac
attccaaaccctaattccaccaattccgacaatctctctcccccgaatctcctccacgtc
acgttcaatcaagattacggctgtttctccagcggcacggaccgtggctttcgtatctac
aactgcgatccatttcgagagctttttcgaagagattttgataccggaggcggtatcggc
atcgtggagatgctgtttaggtgtaacatactggcgctcgttggcgggggagctgatcct
cagtatccaatcaacaaggtcatgatttgggacgatcaccagagccggtgtatcggagaa
ttaacatttaggtctgaagtgcgcggagtgaggcttcggagagatagtatagtggtggtg
cttgagaagaaggtgttggtgtataatttcgcggatttgaagctgttgcatcagattgag
acgtttgagaatccgaaggggttgtgtgaggtctcgcaggggagtggttcgtttgtgatg
gtttgtttcgggttgaggaaaggggaggtgagagttgagcattatttgacgaagaggact
aagtttgtgatggcgcatgattcgaggattgcctgtttgaagctttcacaggatgggacg
ttgcttgctactgcgagtacgaaggggacgttggttagaattttcaacacttatgacggg
actttgttgcaagaggtaagaaggggagtagatagagcagagatatatagtttggcattc
tcctcaacggcacaatggttggcagtgtcaagtgacaagggtactgtacacgttttcagc
ctgaaaaccaattcagttaatgaagggactgataacctggacaacaatattaatcccaaa
cttgccgttacttcgcctggctcgcctttatctttcatcaaaggagtattgcccaagtac
ttcaactcagagtggtcagtggctcaatttcgattgattgagggttctcagtacattgtt
gcatttggtcaccaaaagaatacggttgtcattcttggtttggatggaagtttctaccgc
tgcaagtttgatccagcaaccaatggcgagatgactcaactggaatatcacaactttctg
aagcccgaagaagctttctga
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integrated database retrieval system