KEGG   Daucus carota (carrot): 108215154
Entry
108215154         CDS       T05350                                 
Name
(RefSeq) autophagy-related protein 18a
  KO
K22991  WD repeat-containing protein 45
Organism
dcr  Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dcr04131]
    108215154
Membrane trafficking [BR:dcr04131]
 Autophagy
  Other autophagy associated proteins
   Others
    108215154
SSDB
Motif
Pfam: PROPPIN WD40_WDHD1_1st WD40 Beta-prop_EML_2 WD40_Prp19 WD40_CDC20-Fz ANAPC4_WD40 Beta-prop_Vps41 WDR55 Beta-prop_IFT140_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st BCAS3_WD40 Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_HPS5 Ge1_WD40 EIF3I Beta-prop_IFT122_2nd Beta-prop_RSE1_2nd RMC1_N KNTC1_N NBCH_WD40 Beta-prop_IFT80_2nd DUF6849 Beta-prop_TEP1_2nd
Other DBs
NCBI-GeneID: 108215154
NCBI-ProteinID: XP_017243008
UniProt: A0AAF0WST3
LinkDB
Position
3:complement(61072441..61080159)
AA seq 406 aa
MTTLSPSPWPTPQPDGIESPPISNPNPNSTPQTPPSDVLDIPNPNSTNSDNLSPPNLLHV
TFNQDYGCFSSGTDRGFRIYNCDPFRELFRRDFDTGGGIGIVEMLFRCNILALVGGGADP
QYPINKVMIWDDHQSRCIGELTFRSEVRGVRLRRDSIVVVLEKKVLVYNFADLKLLHQIE
TFENPKGLCEVSQGSGSFVMVCFGLRKGEVRVEHYLTKRTKFVMAHDSRIACLKLSQDGT
LLATASTKGTLVRIFNTYDGTLLQEVRRGVDRAEIYSLAFSSTAQWLAVSSDKGTVHVFS
LKTNSVNEGTDNLDNNINPKLAVTSPGSPLSFIKGVLPKYFNSEWSVAQFRLIEGSQYIV
AFGHQKNTVVILGLDGSFYRCKFDPATNGEMTQLEYHNFLKPEEAF
NT seq 1221 nt   +upstreamnt  +downstreamnt
atgactactctctccccatccccctggcccaccccccaacccgacggcatcgaatctccc
ccaatttcaaaccctaaccctaattccactccacagactcccccaagcgacgtcctcgac
attccaaaccctaattccaccaattccgacaatctctctcccccgaatctcctccacgtc
acgttcaatcaagattacggctgtttctccagcggcacggaccgtggctttcgtatctac
aactgcgatccatttcgagagctttttcgaagagattttgataccggaggcggtatcggc
atcgtggagatgctgtttaggtgtaacatactggcgctcgttggcgggggagctgatcct
cagtatccaatcaacaaggtcatgatttgggacgatcaccagagccggtgtatcggagaa
ttaacatttaggtctgaagtgcgcggagtgaggcttcggagagatagtatagtggtggtg
cttgagaagaaggtgttggtgtataatttcgcggatttgaagctgttgcatcagattgag
acgtttgagaatccgaaggggttgtgtgaggtctcgcaggggagtggttcgtttgtgatg
gtttgtttcgggttgaggaaaggggaggtgagagttgagcattatttgacgaagaggact
aagtttgtgatggcgcatgattcgaggattgcctgtttgaagctttcacaggatgggacg
ttgcttgctactgcgagtacgaaggggacgttggttagaattttcaacacttatgacggg
actttgttgcaagaggtaagaaggggagtagatagagcagagatatatagtttggcattc
tcctcaacggcacaatggttggcagtgtcaagtgacaagggtactgtacacgttttcagc
ctgaaaaccaattcagttaatgaagggactgataacctggacaacaatattaatcccaaa
cttgccgttacttcgcctggctcgcctttatctttcatcaaaggagtattgcccaagtac
ttcaactcagagtggtcagtggctcaatttcgattgattgagggttctcagtacattgtt
gcatttggtcaccaaaagaatacggttgtcattcttggtttggatggaagtttctaccgc
tgcaagtttgatccagcaaccaatggcgagatgactcaactggaatatcacaactttctg
aagcccgaagaagctttctga

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