Daucus carota (carrot): 108215156
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Entry
108215156 CDS
T05350
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit, cytoplasmic
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108215156
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dcr01007
]
108215156
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dcr03016
]
108215156
Enzymes [BR:
dcr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
108215156
Amino acid related enzymes [BR:
dcr01007
]
Aminoacyl-tRNA synthetase
Class II (U)
108215156
Transfer RNA biogenesis [BR:
dcr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
108215156
Prokaryotic type
108215156
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
tRNA-synt_2d
EAD7
DUF2508
Motif
Other DBs
NCBI-GeneID:
108215156
NCBI-ProteinID:
XP_017243011
UniProt:
A0AAF1AUQ1
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Position
3:complement(52606979..52615180)
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AA seq
594 aa
AA seq
DB search
MPTVSVGRDLLFKALGRPYTEEEFDNLCFQFGIELDDVTTEKAIIRKEKHIDDQVADNDE
EVIYKIEIPANRYDLLCLEGIVQSLRIFTGLDPIPVYRVREPIRKESMLKMHVKPKTAEI
RPYIVCAVLRGITFDEARYNSFIDLQDRLHQNICRRRTLVAIGTHDLDTIEGPFTYEALS
PTDINFVPLKQERSFRADELMKFYESDLKLKKFLHIIAESPVFPVIYDRKRTVLSLPPII
NGAHSAITLKTKNVFIECTATDLTKAKIVLNTMVTMFSLYCDNKFEAEPVEVIYPDGKSH
IYPDLSSYNMEVPLSYITGLLGVSLEAGKVAGLLNKMQLHAEPHALPNGDHTFNVSVPPT
RSDVLHPCDVAEDVAIAYGFNEIPTRKLPSLKPLALNQFSDLIRTEIAMSGYTEVLTFIL
CSYKENFAMLNRKDDKSKAVEIGNPRSSDFEAVRTTLMPGLLKIVGQNKDHPKPIKIFEV
GDIAVLDESKDVGATNRRQLAALYCGATSGFELIHGLLDRVMEVTGTSFVKSKDTTGYYI
ECSSEPEFLPGRQASIIYKGKHIGNFGIVHPEVLRNFDIPDTCSFLELSIEHFL
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgtgagcgttggaagagacctcttattcaaagctctcggacgaccttacact
gaagaagagtttgataatttgtgcttccagttcggtatagagctcgatgacgtgacaacc
gagaaggcgataattagaaaagaaaagcatatagatgaccaagttgcggataatgatgaa
gaggtcatttacaaaattgagattccggctaatagatatgatttactttgtcttgaggga
attgtgcaatctcttcggatatttactggacttgatccgatacctgtgtatagggttcgt
gagcctatacgtaaggaatctatgcttaagatgcatgtcaaaccaaagactgctgagatt
cgcccgtatattgtttgtgctgttttgagaggtataacatttgatgaagcaagatataat
agctttatcgatcttcaagacaggcttcaccagaacatttgccggcggagaaccctggtt
gctattgggacacatgacttggatacgatagaagggcctttcacatatgaggctttatca
cctacagatataaactttgtcccactgaaacaggagagaagcttcagagcggatgagctg
atgaagttttacgaatcagatttgaagttgaaaaaattcttgcatataattgcagaatca
ccagtgttccctgtcatttatgaccgcaagagaactgtgctatctttgccgccaattata
aatggtgcacattcggccattaccttaaagaccaagaatgtgttcattgaatgcacagcc
actgatttgacgaaagccaaaatcgttctgaacacaatggtgaccatgttttctctgtac
tgtgataacaagtttgaggctgaaccagttgaagtaatataccctgatggaaaatcacat
atttatcctgatctttcatcttacaatatggaagtgccgctatcgtacattactggctta
ttaggagtctcgttggaagccggcaaggttgctggtttattaaataaaatgcagttacat
gctgagccccatgccttgccaaatggtgatcacacgttcaatgtatcagttccgcctaca
aggagtgatgtgcttcatccctgtgatgttgcggaggatgttgccatagcttatggtttc
aatgaaattcccacacggaagcttccatctttgaagcctttggctctgaatcagtttagt
gaccttattagaacggagattgcgatgagtggttatacagaggtattgacatttatattg
tgttcttacaaagagaattttgcaatgctaaaccgtaaagatgataaatcgaaggcagtg
gaaattgggaatccccgatcttctgatttcgaggctgttcgaactactctgatgcctggc
ttattgaaaattgttggacaaaacaaagaccatcctaagcctataaagatattcgaagtg
ggtgatatagcagttctggatgaatcaaaggatgttggtgccacaaatcgtcgtcaactg
gcagctctatattgtggtgccacctcaggatttgagctaattcatggcctactggataga
gttatggaagtaactggaacgtcattcgtgaaatctaaggacacaaccggctattatata
gaatgctcatctgaacctgaatttttacctggtagacaagcaagtatcatctacaaaggg
aagcatattggtaatttcggcattgttcacccagaggtcttgcgcaattttgatatccct
gatacatgctccttcttggaacttagtatagagcacttcttgtag
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