Daucus carota (carrot): 108215203
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Entry
108215203 CDS
T05350
Name
(RefSeq) serine/threonine-protein kinase rio2
KO
K07179
RIO kinase 2 [EC:
2.7.11.1
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108215203
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
dcr01001
]
108215203
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dcr03009
]
108215203
Enzymes [BR:
dcr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
108215203
Protein kinases [BR:
dcr01001
]
Serine/threonine kinases: Other
RIO family [OT]
108215203
Ribosome biogenesis [BR:
dcr03009
]
Eukaryotic type
Pre-40S particles
Kinases
108215203
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIO1
Rio2_N
ABC1
APH
OspG_kinase
Kdo
Pkinase
TCAD9
Motif
Other DBs
NCBI-GeneID:
108215203
NCBI-ProteinID:
XP_063945494
LinkDB
All DBs
Position
3:54172822..54179025
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AA seq
472 aa
AA seq
DB search
MKLDVNVLRYLSKDDFRVLTAVEMGMRNHEIVPAELITRIASLKHGGTYKVMKNLLKHKL
LHHDSSKYDGFRLTYLGYDFLAIKTLVNRGIFTSVGRQIGVGKESDIFEVANEDGTIFAM
KLHRLGRTSFRAVKSKRDYLKHRSSFNWLYLSRLAALKEYAFMKALQEHGFPVPNAVECN
RHCVIMSLVQGYPLVQVKQLQNPDTVFEKIIGVIVRLAEHGLIHCDFNEFNIMIDDDEKI
TVIDFPQMVSVSHTNAQMYFDRDVECIFKFFRKRFNISYQENLEDSNGSDLVSDVSDRLN
FSSITKVSDALDKELAASGFTKKVQADIEKFNGGDIDDESSSGDDDTEDDETGHKQHRLN
TISEPAVDLSSLTLKDKVSGEQHEVKVTQQSTEASQGNGDETEDLSDQDDEEGSELQDNL
ELKESLTKQRRRAIRAAQGGHKTFAKRNTCKDKGGKCPQNSRIQNKQMCNSW
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaagctagacgtgaatgtgttgcgatatctatcgaaagatgatttcagggttctcact
gctgttgaaatgggaatgcgaaatcacgaaattgtacccgctgaacttatcacacgtata
gcttctctcaagcatggaggcacttacaaggtgatgaagaacttgctcaagcacaagctg
ctacaccatgactcttccaaatacgatggtttccggctaacctaccttggttatgatttt
cttgctattaaaacgttggttaaccgtggaatttttacatctgtgggtcgtcaaattggt
gtagggaaagaatctgatatctttgaggttgcgaatgaagatggtacaatatttgcaatg
aagcttcataggctgggtagaacttcatttagggcagttaaatcaaagcgtgattacttg
aagcaccgcagtagcttcaactggctctacttgtccaggcttgcagctcttaaagagtat
gcctttatgaaggctttgcaagaacacggtttccctgttccaaatgctgtggaatgcaat
cggcattgtgtaattatgtcacttgtgcagggttatccgcttgtgcaggtaaagcaactg
caaaacccagacactgtgttcgagaaaatcatcggggttatcgttcgattagctgaacat
ggccttatccattgtgatttcaatgaattcaatattatgattgacgatgatgaaaagatt
actgtaatagattttccacaaatggtctctgtgtctcacacgaatgctcagatgtacttt
gaccgtgatgttgaatgcatctttaaatttttcaggaaaaggtttaacatctcttatcaa
gagaacttggaggattccaatggctcggatctagtctcagatgtatctgacaggctaaac
ttttcttcaataacaaaagtttctgatgccctcgacaaagaactagctgcaagtggtttt
actaaaaaagttcaagctgatattgaaaagtttaatggaggagatattgatgatgagtca
agttctggagatgatgacactgaagatgatgaaactggacataaacaacatcgcttgaac
acaataagtgaaccagctgtggatttgagttcattgaccttgaaggataaggtatctggt
gagcaacacgaagttaaggttacacagcaatccactgaagcaagccaaggaaatggagat
gagactgaagatctaagtgaccaggatgatgaagaaggaagtgagcttcaagataatctt
gaactcaaggagagtctaacaaagcaaagacggagggctattcgagcagctcaaggggga
cataaaacctttgcaaaaagaaatacatgcaaagacaaaggtggcaagtgtcctcaaaat
tcaaggatccaaaataaacaaatgtgtaatagttggtga
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