Daucus carota (carrot): 108215251
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Entry
108215251 CDS
T05350
Name
(RefSeq) LEC14B protein
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcr04121
]
108215251
Ubiquitin system [BR:
dcr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
108215251
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_SCAP
WDR54
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
108215251
NCBI-ProteinID:
XP_017243154
UniProt:
A0A166CEZ0
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Position
3:61436239..61443319
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AA seq
488 aa
AA seq
DB search
MFSRFWRRRLTTDSMGYALSRLELDSDCSNSGASNLVDENFSPNKPVNVLDHEVAQLTKL
NSAPHDHSGDIIPGKRGSSVNTVKMLAGRECNYSRRGRFSSADRCHVLNKYLPGNCPSLV
DRMTTRAYVSQFSTDGSLCVVAFQGSHIKVYNIDRGWRVHKNIITKSLRWTVTDTSFSPD
QRHLVYATMSPIVHIVNITSGATDSRANITEIHDGLEFSRDDGEGYSFGIFSVKFSTDGQ
ELVAGSSDDAIYVYDLVANKLSLRIDAHTSDVNTVSFADESGNLIYSGSDDNSCKVWDRR
CFKPKGKPAGILIGHLEGVTYLDSRGDGRYLISNGKDQTIKLWDIRRMSSSSNCKPVLRK
YDWDYRWMDYPCPTRNFTHPNDQSVATYRGHAVLRTLIRCYFSPAHSTGQKYIYTGSHDS
CVYIYDVVSGTQVAKLKHHKSTVRDCNWHPYYPMLVSSGWDGDVVKWEPGNEEAPAPSVK
GRIDRREV
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgttctcgagattctggagaaggagacttacaactgatagtatggggtatgccttaagt
agattggagcttgattcagattgttctaatagtggtgcatcaaacttggttgatgagaat
ttttctcccaacaaacctgtgaatgttctggaccatgaagttgctcaactaacgaagctt
aattcagcacctcatgatcattcaggcgacattattcccggaaagcgcggatcttcagtc
aatactgtgaagatgctagctggtcgagaatgtaattattcaagaaggggaaggttttca
tcagcagatcgttgtcatgttcttaataaatatctaccaggaaattgtccatctctagta
gaccgaatgacaacccgggcttatgtctcacaattctctactgatggttccctttgtgta
gttgcatttcagggaagccacattaaagtttacaatatagacagagggtggagagttcat
aagaacattataacgaaaagcttgcgatggacagtaactgatacatctttttcgccggat
caaagacatcttgtttatgctactatgtctcccattgttcatattgttaatataacatct
ggtgcaacggattctcgggcaaatataacagagatccatgatggtcttgaattttccagg
gatgatggtgaaggatattcgtttgggatattttctgtgaaattttctactgatggacaa
gaacttgttgctggaagcagtgatgatgcaatttatgtttatgatcttgtagcaaataag
ctttctcttcgaattgatgcacacacgtctgatgtgaacaccgtatcttttgctgatgaa
agcgggaatcttatatactctgggagtgatgataattcttgcaaggtttgggacaggcgc
tgttttaaaccaaaaggaaagccagctgggatcctcataggacatttagaaggtgttaca
tatctggatagccggggagatggacgatatttaatttcaaatggtaaagatcagaccatc
aaactctgggacatccgaagaatgtcttcgagtagtaattgcaagcctgtattaaggaaa
tatgactgggattaccgatggatggactacccgtgtccaacaaggaatttcacacaccca
aatgatcagtcggtggcaacgtacagaggtcatgcagtgttgcgcacactcattcgttgc
tacttctcaccagctcatagcactggccagaagtacatctacacaggatctcatgattct
tgcgtttatatatatgatgtggtgagtggaactcaagttgcaaaactcaagcaccataaa
tcaactgtaagagattgtaactggcatccttattatccaatgcttgttagctcaggctgg
gatggggatgttgttaaatgggagcctgggaatgaagaagctccagctccttcagttaag
ggaagaatcgacaggagagaggtatga
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integrated database retrieval system