Daucus carota (carrot): 108215278
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Entry
108215278 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108215278 isoform X1
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dcr03009
]
108215278
Enzymes [BR:
dcr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
108215278
Ribosome biogenesis [BR:
dcr03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
108215278
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
RsmI_C
Motif
Other DBs
NCBI-GeneID:
108215278
NCBI-ProteinID:
XP_017243192
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All DBs
Position
3:12829666..12838673
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AA seq
365 aa
AA seq
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MASSAVMSSKALVLMRSSSCIAPRNFIFLIPKLKPTPTLYHINTLSFFCSTPQNPKEHPH
LTAQEQQSPSKKGILKPGLYLVGTPIGNLEDITLRALRVLKSADVILSEDTRHSGKLLQH
YDIKTPLLSYHKFNESQREQVVLKRLQEGEIVALISDAGTPGISDPGMDLAKLCTDNNIL
VTPIPGPSALVAAVSASGLPTNEFTFVGFLPKHAGTRKERLSVSANEATTQIFFVPPHKL
CQFLEETSLVFGDSRRCVMARELTKIHEEFWRGTLGDAKIVFSTRMPKGEITFLIEGKAV
CIAETPSESQLENELGELISNGHSLSEAVKVVAAGTSTRRKTIYSLALRKFGKQVEAEDD
VLRTL
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggcatcttcagcagttatgtcgagtaaagcccttgtgcttatgcgttcttcttcttgt
attgcccctcgaaatttcatcttcctcatcccaaaactaaagccaactcccaccctttat
catatcaatactctctcatttttctgttccactcctcaaaaccctaaagaacaccctcac
cttactgcccaagaacaacaatccccatctaaaaagggaattttgaagcctggtttgtat
cttgtaggcacccctattggcaatcttgaagatattactcttcgtgctctgagggtctta
aaatcagcagatgtaatactttctgaagatacaaggcattcagggaagttgcttcaacac
tatgatatcaaaaccccccttctgagttatcacaaatttaatgagtctcaaagggaacaa
gtggtgttgaagaggttgcaagaaggtgagattgtcgctttgatcagtgatgctggaaca
cctggcattagtgatcctggaatggatttggccaagttatgtacggataataatatactc
gttacacccattcctggtccgtctgctttagtagctgctgtttcagcctctggattgccg
actaatgagttcacatttgttggatttcttcctaagcatgcgggaacaaggaaagagagg
ttgtcagtttctgcaaatgaagcaactacccagatattttttgttcctccacacaagctt
tgccagtttcttgaagagacttctttagtatttggagactctaggagatgtgtcatggct
agggagcttactaagatacacgaagagttctggcgtggaaccctaggtgatgcaaaaata
gtgttctcaactcgcatgccaaagggggagataacattcttgattgaaggaaaggcggta
tgcattgctgaaactccatctgaatctcagttagaaaatgaacttggagaattgatatcc
aacggccatagtctttcggaggccgtcaaagttgtggctgccggaacatctacaagacga
aaaacaatatattcacttgcacttagaaagtttgggaagcaagttgaggcagaagacgat
gttctgaggactctctga
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