Daucus carota (carrot): 108215592
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Entry
108215592 CDS
T05350
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 3
KO
K11842
ubiquitin carboxyl-terminal hydrolase 12/46 [EC:
3.4.19.12
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dcr01002
]
108215592
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcr04121
]
108215592
Enzymes [BR:
dcr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108215592
Peptidases and inhibitors [BR:
dcr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108215592
Ubiquitin system [BR:
dcr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108215592
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Cnd1_N
FliB_C
Motif
Other DBs
NCBI-GeneID:
108215592
NCBI-ProteinID:
XP_017243586
UniProt:
A0AAF0WZ22
LinkDB
All DBs
Position
4:complement(39340704..39345288)
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AA seq
371 aa
AA seq
DB search
MGAAGSKLEKALGEQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYLNNKT
LTDSEETLLTCLADLFMQISSQKKKTGVIAPKRFVQKLKKQNEIFRSYMHQDAHEFLNYL
LNELVDLLEKEARKAKNDTASLSPPENVANGPKNGHPDGAQKEPLVTWVHKNFQGLLTNE
TRCLQCETVTARDETFLDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQ
KRMKIKKPPQILVIHLKRFKYIEQLSRYKKLSYRVVFPLELKLSNTVEDADAEYSLFAVV
VHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESAVQTFFGSAQEYSSNTDHGYILFY
EGVDAGSGIPS
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcagccgggtccaaattggagaaagcactgggcgagcaattccccgaaggcgag
cgttacttcggtctcgagaatttcggcaacacttgctactgtaacagcgtccttcaggct
ctctacttctgtgttccgtttcgtgaacagttactagaatattacttgaataacaaaact
cttacggattccgaagagactctcttgacatgcctggccgatctttttatgcagattagt
tcacagaagaagaagacaggcgttattgctcctaagcgctttgtacagaaactgaaaaag
caaaatgagatttttcgaagctacatgcaccaggacgcgcatgagttcttgaattattta
ttgaatgaacttgtcgacttactggagaaggaggctcgtaaggcaaaaaatgataccgca
agtttatcgccgcctgagaatgtagcgaacggaccaaaaaatggtcatcctgatggcgct
caaaaggagcctcttgtcacctgggtgcacaaaaactttcaaggtctactcacgaacgaa
acaaggtgcttacagtgtgaaacagtaaccgctagagatgaaactttcttggacttgagc
ctggatattgagcagaacagttcaatcacaagttgtttaaaaaacttcagttccacagag
actttaaatgccgaggacaaattcttttgtgacaagtgttgcagtttgcaggaagcacag
aagaggatgaagataaagaaacctccacagattttggtaattcatctgaagcggttcaag
tacatagagcagctttcaaggtacaagaagttatcgtatcgtgttgtgttcccactagag
ctgaagctgagcaatacagtggaggatgcagatgctgagtattccctgtttgctgtagtc
gttcatgttgggagtgggcccaaccatggacattacgtcagccttgtgaaaagccataat
cactggttgttctttgatgacgaaaatgtggaaatgattgatgagtcagctgtgcagaca
ttcttcgggtcagcgcaggagtattctagtaatacagatcatgggtatatcttgttttat
gaaggagttgatgccggaagtggcatcccaagttga
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