Daucus carota (carrot): 108215596
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Entry
108215596 CDS
T05350
Name
(RefSeq) probable 3-deoxy-D-manno-octulosonic acid transferase, mitochondrial isoform X1
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00540
Lipopolysaccharide biosynthesis
dcr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
108215596
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
dcr01005
]
108215596
Enzymes [BR:
dcr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
108215596
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
108215596
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
108215596
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
108215596
Lipopolysaccharide biosynthesis proteins [BR:
dcr01005
]
Lipid A
108215596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
RGM_N
Motif
Other DBs
NCBI-GeneID:
108215596
NCBI-ProteinID:
XP_017243591
UniProt:
A0AAF0WXT7
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All DBs
Position
4:31897332..31910171
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AA seq
445 aa
AA seq
DB search
MGRHRAGYLVYTLYRSLSHCLSPLIHLHLRFRRFRGIEHPLRWRERLGLPSLPRPPGPLF
WFHAVSLGEGLAALPVIKRCVQRRPDVTVLLTTTTLSAFEVLKHLLPSEVIYQFTPVDTP
VAIDSFLAYWKPNALLLVESELWPNLVMSAARNGITLAILNARMSPKSFRNWSLPAVLQM
MNLMLSKFSLIIPLSNVQAVHFQILQAPPLSICFAGDLKFAVEDSLSYNPDIAILEDLKL
QIDDRPVWMASSIHKGEEKVIVDVHKRLKNIHSDIITIIVPRRPQLGRDITREWKKDGVS
VALRSNHDKLLPETDIYMVDTLGELRSFYRITPIALIGGSLLPGLSGHNISEAAAAGCAV
LTGHHVGHFLNMVSEMQRINPLSVHQVAGNIELCEVLTELFSNCIALEARRAAGKQAYHA
LSNGVGESVWNLLNCHVFGKALEET
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggggagacacagagctggttacttagtatacacactatacagaagtcttagccactgt
ttgtctccactcatacaccttcatctccgctttcgtagattccgaggcatcgagcaccca
ctccgatggcgtgagcgtcttggtcttccttctcttcctcgtcctcctggtcccctcttt
tggttccacgctgtctctttaggtgaaggtctggcggcattgcctgtgatcaagcgttgc
gtgcagcggagacctgatgttacggttttgttgaccacaaccactctatctgcatttgag
gtactaaagcatcttcttccatctgaggtcatatatcagtttacacctgttgatacacca
gtcgctatagattccttcttggcctactggaagccaaatgcacttttgcttgtggagagt
gaactttggccaaatcttgttatgagtgctgcaagaaatggtattacccttgcaatatta
aatgcacgaatgtctccaaaatcttttaggaactggtctttacccgcagttcttcaaatg
atgaatctaatgctgtcaaaattttcattgattatcccattgagcaacgtgcaggcagtc
cattttcagatactgcaagcaccaccgctttctatctgttttgctggtgatttgaaattt
gctgtagaagattctttgagttataatcctgacattgcaattctggaagatttgaagcta
caaattgatgatagacctgtttggatggcttcttccatacacaagggagaagaaaaagtg
attgtagatgttcacaagaggttgaagaacatacactctgatataatcaccattattgtg
cctcggcgtccacagcttggtcgagatattacacgtgaatggaaaaaagatggggtgagt
gttgcactaaggtctaaccatgacaaacttttgccagaaactgatatctatatggtagat
acgctaggtgaactgagaagcttttacagaataactccgatagctctcattgggggttct
cttttgcctggtttaagtggccacaatatatcagaagctgctgctgctggctgtgctgtt
ttaactggtcatcatgttggccacttcttgaacatggtatcagaaatgcaacgaataaat
ccgttgtcagttcatcaggttgctggaaatattgagctctgtgaagttcttactgagctc
ttcagtaattgcattgctttagaagctcgccgcgcagctggaaaacaggcctatcatgcc
ctatcaaatggggtaggtgagagtgtgtggaatcttttgaactgtcatgtctttggaaaa
gctttggaagagacttag
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