Daucus carota (carrot): 108215679
Help
Entry
108215679 CDS
T05350
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 36
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dcr03009
]
108215679
Enzymes [BR:
dcr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108215679
Ribosome biogenesis [BR:
dcr03009
]
Eukaryotic type
90S particles
Helicases
108215679
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
108215679
NCBI-ProteinID:
XP_017243709
UniProt:
A0AAF0WZU4
LinkDB
All DBs
Position
4:43356337..43360926
Genome browser
AA seq
488 aa
AA seq
DB search
MEDHQLTGDFPLFSVKKTPKQPLTTPTPTPPTQTSKPQFLKETSSTPNPTSSFSQLGLSD
WALQTCKELGLKAPTPVQHSCIPRIIAGDDVLGIAQTGSGKTAAFALPMLHKLAEDPYGV
FGLVMTPTRELAYQLAEQFRALGSCLNLRCIVVVGGMDSLTQAHALMQRPHIVIATPGRI
KALINGNPDIASVFSKTKFLVLDEADRVLEPSYEDELRVIFQCLPKSRQTLLFSATMTSD
LEALLELSQNKVYFFEAYEGLETVESLRQEYLLIPKNVKDVYLMHIMSKMEDMKIRSAIV
FVSTCRTCHLLSLILEELDLEVAALHSFKSQSLRLSALHRFKSGQVPVLLATDVASRGLD
IPTVDLVINYDIPRYPKDYVHRVGRTARAGRGGLALSFVTQNDVELFLRIEAELNKKLEK
FDCKENEVIADITKVYQARRVATMKLVDDGFEDKENERKAQKQKMLEEKGLLKGKNKKRK
KGGKGGHH
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggaagaccaccaactcaccggcgacttccccttattctccgtcaaaaaaacacccaaa
cagcccctaacgactcccactccaactccaccaacccaaacatccaagccccaattctta
aaagaaacatcctcaacccctaatcccacttcctcattttcccaactgggcctatccgat
tgggccctccagacctgcaaagagctgggcctcaaagcccccactccagtccagcacagc
tgcattcctcgtattattgccggggatgacgtgttgggaattgcccagactgggagcggc
aaaacggcggcgtttgctctgcctatgttgcataagttggcggaggatccgtatggggtt
ttcgggttggtgatgactccgacccgggagctggcgtaccagctggccgagcagtttcgg
gctctcgggtcgtgtttgaatttgaggtgtattgttgtggttgggggcatggactcgttg
acgcaggctcatgcgttgatgcagaggccacatattgttattgctactccggggaggatc
aaggctcttattaatggcaatcccgatattgcttccgtcttttcgaaaactaagtttctg
gttttggatgaagccgacagagttttggaaccaagctatgaagatgaacttagagtgatc
ttccagtgtttgccaaagagtagacagactttattattttcggcaacaatgacaagtgat
ttagaagcgttgcttgagctttcacaaaataaggtttacttttttgaagcatatgaaggt
ctcgagactgtagaatccctcaggcaggagtatctacttatacccaaaaatgtgaaggat
gtctatctgatgcacattatgtccaaaatggaggacatgaaaattcgttctgccatagtt
tttgtatcaacctgcagaacttgccatcttctaagtttaatcctggaagagcttgatcta
gaagtggcagcattacattcattcaaatctcagtctctacggctttcagcattacatcgg
ttcaaatctgggcaggttcctgtattgcttgcaactgatgtcgccagccgtgggttagat
attcctaccgttgatttggtgatcaattatgatattccaagatacccaaaggattatgtt
catcgtgttggacgtactgctagagcagggagaggaggtctggcgctgagttttgttacg
cagaatgatgtagagctttttctacggatagaagctgaattgaacaagaaattagagaag
tttgactgcaaagaaaacgaagttattgctgatattaccaaggtttatcaggccagacgt
gttgcaacaatgaagctagtggatgatggatttgaggataaagaaaatgagcgcaaagct
caaaaacaaaagatgcttgaagagaaaggactattgaagggaaagaacaaaaagagaaaa
aagggaggaaaaggcggacatcattga
DBGET
integrated database retrieval system
