Daucus carota (carrot): 108215718
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Entry
108215718 CDS
T05350
Name
(RefSeq) protein PIGMENT DEFECTIVE 338, chloroplastic
KO
K02945
small subunit ribosomal protein S1
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
108215718
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
dcr03011
]
108215718
Ribosome [BR:
dcr03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
108215718
Bacteria
108215718
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RLSB_S1
S1
S1_RRP4
DUF8529
RRP40_S1
RAB3A-like_C
Motif
Other DBs
NCBI-GeneID:
108215718
NCBI-ProteinID:
XP_017243759
UniProt:
A0A165XMN6
LinkDB
All DBs
Position
4:complement(38344575..38351366)
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AA seq
518 aa
AA seq
DB search
MSLYLHPCKALLSHNIFCFESTQNKAISSSYLCSIAKTNTSRTHSSVHGHCRNLIVSENL
PVLRSTHVSFSSKDEIFTELPTTHFGEEGGNENVEEVEELELLDKPFVKNVSNGSVVEVE
QPELRNLDEEEVLEPFLKFFKPRELGEEVYDSEESDFEEEEVEKVSVEYYEPKAGDFVVG
VVVSGNENKLDVNIGADLLGTMLKKEVLPLYHKEMEYLLCDTNKDAEEFMVRGKMGIAKN
DEAMGGESAPGRPVVEPGTILFAEVLGRTLSGRPLLSTRRLFSRLAWHRVRQIKQLNEPI
EVKITEWNTGGLLTRIEGLRAFLPKTELINRTNKYTQLKDNVGQKIHVLVTRINEATNDL
IISEKEAWTMLHLQEGTLLEGTVNKIFPYGAQVRIGETNRSGLLHISSISRARVASVSDL
LAVGEKVRVLVVKSTFPDKISLSIAQLESEPGLFMSDKERVFSEAEEMAKKYRQKMPTTA
SVARKPDQFPADTLSYEDEEKLYSNWKWFKFEMDNEPE
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgtcactctaccttcatccctgtaaggctttactgtctcacaatatcttctgctttgaa
tctacccaaaacaaagctatttcaagctcttatttatgctcaattgctaaaactaacact
tcaagaactcatagttcagttcatgggcattgtagaaatttgattgttagtgagaatttg
cctgttttgagaagtacccatgtttcttttagctcaaaagatgaaatctttactgagtta
ccaaccacccattttggtgaagagggtggaaatgagaatgttgaggaggttgaagagctt
gaattgttggataagccatttgtgaagaatgttagtaatgggtctgttgttgaagttgag
caacccgagttgcgtaatttggatgaagaagaggtgttggagcctttcctgaagtttttt
aagcctagggaattgggggaggaagtttatgattcagaagagagtgattttgaagaggag
gaagtggagaaggtttcggttgagtattacgagcctaaggctggtgattttgttgtcggt
gtggtggtttcgggtaatgagaataaacttgatgttaatatcggggctgatttattgggt
acaatgcttaagaaggaagtgcttcccttgtatcacaaggagatggagtacttgttatgt
gatactaataaggatgctgaggagtttatggttcgagggaaaatggggattgcaaaaaat
gatgaggcaatgggtggtgagtcggctcctggaaggcctgttgtggagcctggaactatt
ttgtttgccgaggttctcggaagaacacttagtggtaggccgttgctctctaccagaagg
ctgtttagtcgcctcgcttggcatcgcgtgaggcagattaagcagctgaatgagcctata
gaggttaaaattaccgagtggaacactggtggtctgcttacaagaattgagggtttacgc
gcttttctccctaaaacagagttgataaataggacaaacaaatatactcagctaaaagat
aatgtgggacagaagatacatgtgctggttactaggataaatgaagctaccaatgactta
attattagcgagaaggaagcatggacaatgttgcatcttcaagagggaacacttctagag
ggaacagtaaataagattttcccatatggtgctcaagtaaggataggcgagactaacaga
agcggattactgcatatatcaagcatcagtcgagctcgagttgcttcagtgagtgacttg
ttagcagttggcgagaaggtcagagttttggttgtaaagtcgacattccctgacaaaatt
tctctcagtattgctcaacttgaaagtgaacctggcttatttatgtcggataaagagaga
gtattttcggaggctgaagaaatggcaaagaagtacaggcagaagatgcccactactgct
tcagtagcaaggaagccagatcagtttccagctgacaccttatcatatgaagatgaggaa
aaattatactcaaattggaaatggttcaaattcgaaatggataacgaaccagaatga
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