Daucus carota (carrot): 108215721
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Entry
108215721 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108215721
KO
K22379
E3 ubiquitin-protein ligase RNFT1 [EC:
2.3.2.27
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcr04121
]
108215721
Enzymes [BR:
dcr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108215721
Ubiquitin system [BR:
dcr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108215721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_2
zf-rbx1
zf-RING_5
Prok-RING_4
zf-RING_6
zf-C3HC4_4
zf-RING_16
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
108215721
NCBI-ProteinID:
XP_017243763
UniProt:
A0A165XAL4
LinkDB
All DBs
Position
4:35673699..35679098
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AA seq
449 aa
AA seq
DB search
MEESSSSSSPSSSQSTNTYTNPNPNPNNSNSSPPPPTQNTNSTRSRRSRYSTLLSTFRFL
QAPLSTILSHYFPATALNPNPSHADAAEVSIRIVPGQERNQADHELGLAHSSGSAEIDSL
QDDRSYVSGSAASGNGNADSNSVPAGAAAPRTPNQQRYDLQHAARLIEQIIPFSLLLMLV
FIRQHLQGFFVTIYITAFLFKSNDILKKQTALKGERKLAVLMGYFLVFTLHVIGIYWWYR
NDDISYPLIMVPPKEIPPFWHALFTILVNDTMVRQAAMAFKLILLMYYRNGKGHNFRRQG
QLLTLVEYTLLLYRALLPAPVWYRFFLNKDYGSLFSSLTTGLYLTFKLTTVVEKVRSFFS
AFKALSRKEMHYGSYATLEQVNDAGNLCAICQEKMHVPVQLCCKHVFCEDCVSEWFERER
TCPLCRALVRAADMWSYGDGSTSLFFQLY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggaagaatcatcatcttcatcatccccctcatcatcacaatccacaaacacatataca
aaccctaaccctaaccctaacaacagtaacagctcacctcctcctcctacacagaacacc
aattcaacaagaagcagaagaagcagatactcaacacttctctccacgtttcgcttctta
caagcacctctctccactattctctcccattacttccctgccactgcgctaaaccctaac
cctagccacgccgacgctgcggaggtttctatccgtattgtccccggtcaagaacggaac
caagctgatcatgaattagggctcgctcattcgtccggtagcgccgagattgattctctc
caggatgatcgcagttatgtttctggtagcgcagctagtggtaatggaaatgctgattcc
aattctgttccggctggtgctgcggctccgcgtactccgaatcaacagcggtatgattta
cagcacgcggcgaggctgatcgagcagattattccgttttctttgctcttgatgctcgtt
tttattcgacagcacttgcaaggattctttgtcacaatatacataactgctttcctgttc
aagtcaaatgatattcttaagaagcagactgctttaaagggggaaaggaaactggcagtt
ctaatgggatattttttggtttttacgcttcatgtgattggaatctattggtggtaccgt
aatgatgatatttcctacccattaatcatggttcctccaaaagaaatacctccattttgg
catgctctattcactattttagtcaatgatacgatggtgcggcaagcagcaatggctttc
aaattgatcctgctaatgtattacagaaatggcaagggtcataactttcgtagacagggc
caactgctgactctagttgaatacacgttgttattatatcgtgcactgttgccggcacct
gtttggtatcgtttttttctgaacaaagattatggaagcctcttctcatcactgactacg
gggctgtacttaacattcaagctaactaccgttgttgaaaaggtacgatccttcttctct
gcctttaaggccttgtcacgaaaggaaatgcactacggttcttatgccacgctggagcag
gtaaatgatgcaggaaacttatgtgctatatgccaggagaagatgcatgttccagttcag
ttatgttgtaaacacgtgttttgtgaagactgcgtttcagaatggtttgagagagaaagg
acttgccctttatgcagggctttggttcgggcagctgatatgtggtcgtatggtgatggt
tcaacaagtttgtttttccagttatactag
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