Daucus carota (carrot): 108215837
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Entry
108215837 CDS
T05350
Name
(RefSeq) heparanase-like protein 3
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00531
Glycosaminoglycan degradation
dcr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
108215837
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
dcr00536
]
108215837
Enzymes [BR:
dcr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
108215837
Glycosaminoglycan binding proteins [BR:
dcr00536
]
Heparan sulfate / Heparin
Enzymes
108215837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
108215837
NCBI-ProteinID:
XP_017243916
UniProt:
A0AAF0WUY6
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All DBs
Position
4:32895206..32898808
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AA seq
541 aa
AA seq
DB search
MGLQMKMICIGVCIIHFFFMNVCSQEDAGGESTAQGTVFVDGKSGIGFVDSDYVCATLDW
WPPEKCDYGTCSWGKASLLNLDLTNEIFLKAIKAFTPLKIRLGGSLQDKLIYETEDQRQP
CTPFAYKASELFSFTKGCLPMHRWDELNLFFEKTGASIIFGLNALNGRSTNVSTGIAVGK
WDSTNAESFIRYTVKKNYMIHGWELGNELCGSGVGLRVAAAQYSSDTISLVNLVQDIYKG
EEFQPLIISPGGFFDANWFKEYLSKTPKLNVVTHHIYNLGAGVDQHLVEKILNPVFLDGI
ADTFKQLQGIVKNSGASAWVGESGGAYNSGHNLVSNAFVYSFWYLDQLGMAATYDTKTYC
RQTLIGGNYGLLNTKTFVPNPDYYSALLWHRLMGRKVLSTSFSGTKKLRAYAHCAKQSNG
ITMLLINLDNNTTVVVTPAFNNPSSQQGRRGFLYKRTKLMQVSHGDQMYSTETREEYHLT
AKDRDLHSQTMLLNGNALTLTSSGDIPTFIPVNVNSSEPIKVAPHSIVFVHLPNVVLPAC
K
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgggcttgcagatgaagatgatatgtataggggtgtgcatcattcacttctttttcatg
aatgtttgttcacaggaggatgcagggggagaaagtacagctcaaggcactgtgtttgta
gatggaaaaagtggtattggatttgtagacagtgattatgtgtgtgccactttggattgg
tggccacctgaaaaatgtgattatgggacttgtagctggggcaaggcttctttactcaac
ttggatcttactaatgagattttcttgaaagcaataaaagctttcaccccgttaaagatt
agattaggtggcagcttgcaagataaactcatatatgaaactgaagatcaaagacaaccg
tgcacaccatttgcttataaagcctcagagttgtttagtttcactaaggggtgcctgcct
atgcacagatgggatgaacttaatctattctttgagaaaacaggggccagtatcattttt
ggattgaacgctcttaatggcagatccacaaacgtaagtactggtattgctgttggaaaa
tgggattccacaaatgcagaatctttcatacgttacactgtcaagaaaaattacatgatc
catggttgggagctgggaaatgagttgtgtggaagtggagtaggcttaagagttgcagca
gctcagtactcttcggacacaatttctcttgtgaatttagttcaagatatatacaagggt
gaagagtttcagccactaattatatcaccgggaggattctttgatgcaaattggttcaaa
gaataccttagcaagacgcccaaactaaatgttgttactcatcatatttataatcttggt
gcaggagttgatcaacacctcgttgaaaaaattcttaatccagtgtttcttgatggcata
gctgatacctttaaacaactccagggcatagtaaaaaattctggggcatccgcatgggtt
ggtgagtcaggaggggcatacaatagtggtcataatctcgtgtccaatgcatttgtgtat
agcttttggtacttggatcagcttggtatggctgcaacttatgatacaaagacatactgc
agacaaacactgataggcggaaactatggtttactcaacacgaaaacctttgttccaaat
cctgattactacagtgctcttctttggcaccggctgatgggaagaaaagtcctctccaca
agcttctctggcaccaagaaactccgtgcttatgctcattgtgcaaaacaatctaatggt
atcacaatgcttttaatcaatcttgacaacaacacaacagttgtggtaacaccagccttc
aataacccttcatcgcagcaaggcaggcgcggttttctgtacaagagaacaaagcttatg
caagtctctcacggagatcaaatgtacagcacagaaacaagagaagaataccatctgaca
gcaaaggatcgcgatttacacagtcaaacaatgcttcttaatgggaatgcactgacctta
acttcatccggggatataccaacatttattcctgtaaatgtaaattcgtcggagcctatt
aaagttgctcctcattctattgtatttgttcaccttccgaatgtcgttctccctgcttgc
aagtaa
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