Daucus carota (carrot): 108215920
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Entry
108215920 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108215920 isoform X1
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dcr03016
]
108215920
Enzymes [BR:
dcr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
108215920
Transfer RNA biogenesis [BR:
dcr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
108215920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pus10_C
Pus10_N_euk
Motif
Other DBs
NCBI-GeneID:
108215920
NCBI-ProteinID:
XP_017244037
UniProt:
A0AAF1AWN2
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Position
4:complement(41989945..41996809)
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AA seq
551 aa
AA seq
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MANTAATTDPLNGHDKSVTDSLPAGNDLKLLIDAVRSLPHPALKHLLSLKVCVRCIFRIF
LVHECLYSCAKLSPSLLYSNIENGSESEGELNINEDYVCRICLGILQFVYYDQQNVLVKS
DSARDFALMIADAVKKEGHLVDSFSLEVSLPPLISENENLVWSIIKKKYHSEEWYQKIVK
SELISTKDVFKLSLTSPLESLMGVKSGLSSFRIRLTYTNLDASKNGKSTAEKIQCNKRRK
TGADGVDSNSIVPTADTENSNVGASEEHGSLESFPAKGLENHENPDCHLEKVNQPCHLTF
ACSRAPMYIGGRYLKYSRNVSQSRWIIDDERMGEASVEEIIGGNILPTCLGDGYKFHAAG
REDIDVRMLGSGRPFLIEIQNARLAPSDVSICEIESRINCHESRHVMVKNLKVLGSEAWN
LMREGEAEKQKQYVALVWISRVLKDDDLETISSFKDMKLLQKTPVRVLHRRSPLEREKII
HWMKIEKIAASSQYFLLHLCTQAGTYIKEFVHGDLGRTYPSIGSLLGCRAEILQLDVTDV
KMDCFLAEKIQ
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaccgccgcaacgacggaccctctcaacggtcacgacaagtctgtaactgac
tctctccccgccggcaacgacttgaagcttttaattgacgccgtccgttccttgcctcac
ccggctctcaaacatcttttatcgctcaaggtgtgcgttcggtgcatcttccggatattt
cttgtacacgagtgtttatattcttgtgctaagctctctccgtcactgttatattctaat
attgaaaacggatcggagtcggaaggggaattgaatatcaatgaggattatgtctgtaga
atttgtttaggtatcttacagtttgtgtactatgaccaacaaaatgtgttggtgaaaagt
gattctgccagggactttgctttgatgattgctgatgctgtaaagaaagaaggccatctt
gttgatagtttttctcttgaagtctccctaccgccactcatctctgaaaatgaaaattta
gtttggtccattattaaaaagaagtaccactctgaagaatggtatcaaaaaattgttaaa
tctgaactcatatcaacaaaagatgtcttcaaactgtctttgacaagtcctcttgaatcg
ctaatgggtgttaaatctggtctgagctctttccgaattcgtttgacctacactaatctt
gatgcttcaaagaacggaaagagtactgctgagaaaattcagtgtaataagagaaggaaa
acaggtgcagatggagtggactccaattctatagtgcctactgctgacactgaaaattca
aatgtaggcgccagtgaagaacatgggtccctggaaagttttcctgctaaagggttggaa
aatcatgaaaatcctgattgccatttggagaaggtcaaccaaccatgtcacctgacattt
gcttgctctagggctcctatgtacattggagggagatacttgaagtactcacgaaatgta
agccagagtcgatggataattgatgatgagaggatgggagaagcatctgttgaagaaatt
ataggtggcaatatccttcctacgtgcctgggtgacggttacaaatttcatgcagctggc
agagaggatattgatgtccggatgttgggttcaggtaggcctttcctgatcgagattcaa
aatgcacggctggccccttctgatgtatctatatgtgaaatagaaagtagaataaattgc
catgagagtagacatgttatggtgaaaaatctcaaggtcctaggtagtgaagcatggaac
ttgatgcgtgaaggagaagcagaaaagcagaaacaatatgttgctctagtctggatttct
cgcgttctcaaggatgatgatttggagactatatcatcattcaaagacatgaaattgttg
cagaagacgcccgtaagggttctccaccgtcgaagtccactagagcgtgaaaagattata
cattggatgaaaattgagaaaattgctgcaagttctcagtatttcctcttgcatctttgt
acccaggccgggacatatattaaggaatttgttcacggagatcttggacgcacttatcct
agcatcggttcacttctggggtgcagagctgagatactgcaacttgatgtcacagatgta
aaaatggattgctttctagcggagaaaatccagtag
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