Daucus carota (carrot): 108215933 Help Entry 108215933         CDS       T05350                                  Name (RefSeq) THO complex subunit 3   KO K12880   THO complex subunit 3 Organism dcr  Daucus carota (carrot) Pathway dcr03013   Nucleocytoplasmic transport dcr03040   Spliceosome Brite KEGG Orthology (KO) [BR:dcr00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     108215933   09122 Translation    03013 Nucleocytoplasmic transport     108215933  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:dcr03019]     108215933    03041 Spliceosome [BR:dcr03041]     108215933 Messenger RNA biogenesis [BR:dcr03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      108215933 Spliceosome [BR:dcr03041]  Complex C   Other components    EJC/TREX     108215933  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     108215933 SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_Prp19 WD40_CDC20-Fz WD40 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_EML_2 ANAPC4_WD40 EIF3I Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_WDR19_1st Beta-prop_NOL10_N Beta-prop_RIG_2nd Beta-prop_Aladin Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 DSE1_N Beta-prop_TEP1_C eIF2A Beta-prop_WDR75_1st Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_HPS5 Beta-prop_EIPR1 Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_DCAF12 Tricorn_2nd WD40_RFWD3 B-prop_COPA_B_2nd TRM82_WD Beta-prop_IFT80_2nd CFAP251_N Beta-prop_WDR41 DUF7099 PAC11 WD_LRWD1 Beta-prop_ACSF4 Beta-prop_WDR11_1st Beta-prop_Nup120_160 PD40 Motif Other DBs NCBI-GeneID:  108215933 NCBI-ProteinID:  XP_017244055 UniProt:  A0A165Y829 LinkDB All DBs Position 4 Genome browser AA seq 313 aa AA seqDB search MEQSIPFKSLHIREFQGHKKKVHSVAWNCIGTKLASGSVDQTARIWHIEPHGHGKVKDIE LKGHTDSVDQLCWDPKHSDLIATASGDKTVRLWDARSGKCSQLAELSGENINITYKPDGT HVAVGNRDDELTILDVRKFKPLHKRKFNYEVNEIAWNMTGDMFFLTTGNGTVEVLDYPSL RAVDTLMAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISF NHTGEYIALASEDLFIDISVVSSGRSVHQIPCRAAMNSVEWNPKHNLLAYAGDDKNKYQA DEGVFRIYGFEGA NT seq 942 nt NT seq  +upstreamnt  +downstreamnt atggagcagtcgattcccttcaagagcctccatattcgtgagttccaaggtcacaagaaa aaggtacattctgtagcttggaattgcatcggaacaaaactcgcctccggttctgttgat caaactgctcgcatttggcacattgaaccacacggacatggtaaggttaaggatattgag cttaaggggcatactgatagtgtggatcagttgtgctgggaccccaagcactcggacttg attgctactgcttccggtgacaagactgttcgattgtgggatgctcgtagtggaaaatgc tcacagctagcagaacttagtggagagaatatcaatatcacctataaaccagatgggaca cacgtggctgttggaaatagggatgacgaattaacaatactggatgtccggaaattcaaa ccccttcacaagcgcaagtttaactatgaggtaaatgagatcgcatggaatatgaccgga gatatgttctttttgacaactggaaatggcactgtggaggttctagattatccatctctg cgagcagttgacactctaatggctcacacagctggttgttattgcattgcaattgatccc ttaggaaggtactttgctgttggaagtgctgactcattagttagtctttgggatatctcg gagatgctttgtgtgcgtacatttacaaaacttgaatggccagtcaggacaataagtttc aatcacacaggagaatatattgctttggcgagtgaagatttgttcattgacatatcagtt gttagtagtggaagatcggttcaccagattccatgtcgagcggccatgaacagtgtggaa tggaatcctaagcacaatttgttggcgtatgctggagatgacaaaaacaaatatcaggct gatgaaggtgtatttcgcatatacggctttgaaggtgcataa

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