Daucus carota (carrot): 108215955
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Entry
108215955 CDS
T05350
Name
(RefSeq) truncated transcription factor CAULIFLOWER A isoform X1
KO
K09264
MADS-box transcription factor, plant
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dcr03000
]
108215955
Transcription factors [BR:
dcr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
108215955
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Paralog
Gene cluster
GFIT
Motif
Pfam:
K-box
SRF-TF
FliD_C
DUF1192
DUF2071
FapA
Motif
Other DBs
NCBI-GeneID:
108215955
NCBI-ProteinID:
XP_017244085
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Position
4:40949221..40958208
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AA seq
240 aa
AA seq
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MGRGKVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLSEFSTD
SCMERILERYDRYSTTDGQLVATDSISQGSWILEHAKLKAKIEVLQKNQRHYMGEDLESL
SLKELQNLENQLDSALKHLRSKKNQIMFESISQLQKTDKALQDKNHMMSKKIKNKEKELA
QPSPLEQQNQETSSFVLQKTLQPFNVTGDVFQAVGNSGDVEGTSQQQNQTNTMIPAWMLT
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgggcaggggcaaagtacagttgaagaggatagagaacaagataaacagacaagttact
ttctcaaagagaagatctggtttactcaaaaaagcccatgaaatctctgttctttgtgat
gctgaggttgctctcattgttttctctaccaaaggcaaactttctgaattttccacggat
tcttgcatggaaaggattcttgaacgatacgatagatattcaacaacagatgggcaactt
gttgctactgattctatatcacagggaagttggattttagagcatgcaaagcttaaggcg
aaaatagaagttttacagaaaaatcaaaggcattacatgggtgaggacctagagtcttta
agtcttaaggagcttcaaaatttggaaaaccagctcgattcagctcttaaacaccttcga
tcaaaaaagaatcaaatcatgttcgagtcgatatctcaacttcagaagacggacaaggct
ttacaggataaaaatcacatgatgtcaaagaagatcaagaacaaggaaaaagagctagct
caaccgagtcccctggagcaacaaaaccaagagacttcatcttttgttttgcaaaaaaca
ttgcaaccattcaatgtcaccggtgatgtattccaagccgtaggcaacagcggagatgtg
gaagggacttctcaacaacaaaaccaaactaacacaatgattccagcttggatgctcacg
taa
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