Daucus carota (carrot): 108216068
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Entry
108216068 CDS
T05350
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03030
DNA replication
dcr03410
Base excision repair
dcr03420
Nucleotide excision repair
dcr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108216068
03410 Base excision repair
108216068
03420 Nucleotide excision repair
108216068
03430 Mismatch repair
108216068
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dcr03032
]
108216068
03036 Chromosome and associated proteins [BR:
dcr03036
]
108216068
03400 DNA repair and recombination proteins [BR:
dcr03400
]
108216068
DNA replication proteins [BR:
dcr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
108216068
DNA Replication Termination Factors
ELG1-RFC complex
108216068
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
108216068
DNA repair and recombination proteins [BR:
dcr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
108216068
Check point factors
HRAD17(Rad24)-RFC complex
108216068
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
DNA_pol3_delta2
RCF1-5-like_lid
AAA
Rad17
Sigma54_activ_2
AAA_22
RsgA_GTPase
DUF815
RuvB_N
AAA_5
Mg_chelatase
ABC_tran
AAA_23
AAA_29
AAA_2
AAA_16
nSTAND3
TsaE
AAA_24
SprT-like
POC1
Motif
Other DBs
NCBI-GeneID:
108216068
NCBI-ProteinID:
XP_017244223
UniProt:
A0AAF0WYJ9
LinkDB
All DBs
Position
4:45163850..45168863
Genome browser
AA seq
354 aa
AA seq
DB search
MLWVDKYRPRSLDKVIVHQDVAQNLKKLVSEQDCPHLLFYGPSGAGKKTLIMALLRQMFG
ASVEKVKVENKNWKVDAGSRTLDLELTTLSSTHHVELNPSDAGFQDRYIVQEIIKEMAKN
RPIDTKGKKGFKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSR
CLNVRINAPKEEEIVDVLEFIGRKEGLQLPSGFAARIAEKSNRSLRRAILSFETCRVQQY
PFTNNQLIPAMDWEVYVLEIASDIMKEQSPKRLFQVRGKVYELLSNCIPPEIILKRLLFE
LLKKLDSELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKGFLISTFG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgggtagacaagtacagaccaagatccctcgacaaagtcatcgttcaccaagat
gtcgctcaaaatctcaagaaactggtttcggagcaagattgcccccatttgctgttttat
ggtccttccggggcggggaagaaaaccctaattatggcgttgctgagacagatgttcggg
gccagtgtcgaaaaggtcaaggttgagaacaagaattggaaagttgatgctggaagcaga
actcttgatctagagcttacaacattatccagtacccaccacgtggaactaaaccccagt
gatgcaggcttccaggacagatacattgttcaagagataatcaaggaaatggcaaagaac
agaccgattgacacgaaaggaaagaaaggatttaaagtactggtgcttaatgaggttgac
aagctctcaagagaagcacagcattctctacgaagaacaatggagaaatacagtgcatca
tgccgccttatactgtgctgcaacagctcttcaaaggtcaccgaagcagttcgttctcgt
tgtttgaatgtacgaattaatgctccaaaggaagaagagattgtagacgttttagaattc
atcggcaggaaagaggggctgcaacttccgtctggatttgctgctcgcattgcagagaag
tcaaatcgaagtttaaggagggctatattatcatttgagacatgccgagtccaacagtat
ccatttacgaacaatcagttaatacctgcaatggattgggaggtatatgtactggagata
gcatcagatattatgaaggagcagagccctaaaaggttgttccaggttcgtgggaaggtg
tatgagcttttaagtaactgtattcctccagaaattattttaaagaggctgctttttgag
ttattgaaaaaattggattctgaactaaagcatgaagtttgtcactgggctgcatattat
gaacacaggatgcgtctcggacagaaagccatatttcacattgaagcatttgtcgccaag
ttcatgagcatctacaaaggcttcctcatctcaacatttggataa
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