Daucus carota (carrot): 108216076
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Entry
108216076 CDS
T05350
Name
(RefSeq) monofunctional riboflavin biosynthesis protein RIBA 3, chloroplastic isoform X1
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00740
Riboflavin metabolism
dcr00790
Folate biosynthesis
dcr01100
Metabolic pathways
dcr01110
Biosynthesis of secondary metabolites
dcr01240
Biosynthesis of cofactors
Module
dcr_M00125
Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
108216076
00790 Folate biosynthesis
108216076
Enzymes [BR:
dcr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
108216076
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
108216076
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Gene cluster
GFIT
Motif
Pfam:
GTP_cyclohydro2
DHBP_synthase
DnaB_C
Motif
Other DBs
NCBI-GeneID:
108216076
NCBI-ProteinID:
XP_017244235
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Position
4:complement(10039145..10041894)
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AA seq
517 aa
AA seq
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MDSLYLQHSLFPHNFCMIRVKQAHNGTRIGVYRNMATSFSCCAVGVSENSPLKGTENGSV
FDDSAGSVTTFGTLLDAEITPETIDFFVSDAHGDPDCPSQGFSSVEQALSSLRQGKFVIV
VRDENEEAEGSLVMAASQASPKNVAFMVKHGSGIVSVGMKGEDLERLNIPLMSPENEDDV
SAPFFTVSVDAKYGTSSGVSASDRAKTILRISSPDSRAEDFRRPGLVFPLKYRNGGVLTR
AGHTEASVDLVMLAGLHSVSVLSDIVDAEDGSVSSLTNLRKLASEHSIPIVTISDLIRYR
RKREKLVERTSVSSLPTKWGLFEAYAYRSKLDGIEHIVLVKGNIDNGQDVLVRVHSECLT
GDIFGSARCDCGNQLDLAMQIIEQAGRGVVVYLRGHEGRGIGLGHKLEAYNLQDQGHDTV
EANLELGFAADARDYGIGAQMLRDIGVHTMRLMTNNPAKFTGLKGYGLAAVGRVPVMTPI
TEENKRYLETKRTKMGHIYGSDIQGPLISRDKNDIKG
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggattctctttatcttcagcactcattatttcctcataatttttgtatgatcagggtt
aagcaagcgcataatggtactagaattggagtttacaggaacatggccactagtttcagt
tgttgtgcagttggagtgtctgaaaacagtcctctcaaaggcactgaaaatggctcagtt
ttcgacgactcagctggttctgtaacaacttttgggacattactggatgctgagatcacc
ccggaaaccattgatttttttgttagtgatgctcatggtgatcctgattgtccttctcaa
ggcttctcttctgttgaacaggctctttcttcgttgcgtcagggaaagtttgtgatagtt
gtgcgcgatgaaaatgaggaagctgaaggaagccttgtgatggcagcatcccaagcaagt
ccaaaaaatgtggcttttatggttaaacatggttcaggaattgtatcggttggaatgaaa
ggcgaggatttagagcgactaaacatccctctaatgtcacctgaaaatgaagatgatgtt
tctgctcccttcttcacagtctcagtggatgcaaaatatggcacgtcaagtggagtatct
gcttcagacagagcaaaaacaattttaagaatctcatctcctgattcgagagctgaggat
tttagaaggccgggtctcgtgtttcctcttaaatacagaaatggtggggttcttacaaga
gctggtcacactgaggcctcagtagatctagtcatgctggctgggctgcattcagtttct
gtactttcagatattgttgatgccgaggatggatctgtgtcttctttgacaaatttacgg
aagttagcatcagagcacagcataccaattgtcacaatcagtgatttaatcaggtataga
agaaagagggaaaaactagttgaaagaacttctgtttcaagtttgccaactaaatggggt
ttatttgaagcatacgcctatcgttcaaagctagatgggatagaacatatcgttcttgtg
aaggggaacattgacaatggacaagacgttctcgtcagagttcactcagaatgcttgacc
ggtgatatatttggttcggctaggtgtgattgtggaaaccagttagacttggcaatgcaa
attatagagcaggcagggagaggagttgttgtctatctacgagggcatgaagggcgagga
attggccttggtcacaaacttgaggcatacaatttgcaagatcaaggtcatgatactgtt
gaggctaatctagagcttggatttgcagctgatgcgcgtgactatggaattggggctcag
atgctaagggatataggtgttcataccatgcgcctaatgactaacaatccagcaaagttt
actggtctgaaaggctatggtttggcggctgttgggcgtgttccagtcatgacacctatt
acagaagaaaacaagaggtatttggaaacaaagcgaacaaagatggggcatatatatgga
tctgatatccaaggaccactaataagtcgagataaaaatgatataaagggatga
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