Daucus carota (carrot): 108216086
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Entry
108216086 CDS
T05350
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108216086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dcr03000
]
108216086
03021 Transcription machinery [BR:
dcr03021
]
108216086
Transcription factors [BR:
dcr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
108216086
Transcription machinery [BR:
dcr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
108216086
RNA polymerase III system
TFIIIB
108216086
RNA polymerase I system
SL1/TIF-1B
108216086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
DUF4295
Motif
Other DBs
NCBI-GeneID:
108216086
NCBI-ProteinID:
XP_017244250
LinkDB
All DBs
Position
4:complement(43619433..43624193)
Genome browser
AA seq
200 aa
AA seq
DB search
MAEQGLEGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
IMRIRDPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE
TYTAFENIYPVLTEFRKNQQ
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggcggaacagggcttggaaggtagccaacctgtggatctttccaagcatccgtctgga
attgtgcccactcttcagaatatagtatcaactgtcaacttggattgcaagttagacctg
aaagccattgcattgcaagcaagaaatgctgaatataatcccaagcgttttgctgctgtc
atcatgcgaatcagggatcccaagacaactgcacttatatttgcttcagggaaaatggtt
tgtacaggagcaaagagtgaacagcagtcaaaattggctgcaaggaagtatgcacgaatc
attcaaaagcttggatttcctgcaaaatttaaggacttcaagatacagaatattgttggt
tcttgtgatgtgaaatttcccatcaggcttgaaggtctagcttattctcatggagccttt
tctagttatgaaccagaactatttcctggtctaatatatcgtatgaagcaacccaagatt
gtcctcctcatctttgtatcaggaaaaattgtgcttactggagcaaaggtgagagaagaa
acatatacagcatttgaaaatatataccctgttcttacagagttcaggaagaatcagcag
tga
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