Daucus carota (carrot): 108216151
Help
Entry
108216151 CDS
T05350
Name
(RefSeq) THO complex subunit 7B-like isoform X1
KO
K13176
THO complex subunit 7
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03013
Nucleocytoplasmic transport
dcr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108216151
09122 Translation
03013 Nucleocytoplasmic transport
108216151
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108216151
03041 Spliceosome [BR:
dcr03041
]
108216151
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
108216151
Spliceosome [BR:
dcr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
108216151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
Viral_DNA_bp
Inhibitor_I66
Motif
Other DBs
NCBI-GeneID:
108216151
NCBI-ProteinID:
XP_017244325
LinkDB
All DBs
Position
4:50943460..50946970
Genome browser
AA seq
277 aa
AA seq
DB search
MLSTHRPPLGKYTQWVIGRLDFKLKPRIRIVWTTGTEMLKTRKVAGRGDAISSHYAFGQL
EDDTIIKHRLLTRTTTTRGEPPLKKLQKKFTSYALEIEKDADNSNDCERLAKAFLQELTT
FELPLLKSKAVIDANLREKENFNELKAEINRQIIQAEDDIEDLKKQLEESKVERQHKEEC
ETIRKLIAMQPPRSETQKVLTDLEKEIALLEAENISGSRTLELRKKQFALLLHVVDELQN
TIEEEPRSLMEEMRNAMEDHKNGIEDASCGPDAMAVD
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgttgagcacacaccgacccccgctgggaaaatacacacagtgggtgattggtcgctta
gatttcaaattgaagcctcgtatcaggattgtttggacaactggaacagaaatgttgaaa
accaggaaagttgccggtaggggagatgcaatatcttcacattacgcttttggtcaactt
gaagatgatacaattatcaaacacaggcttctcacgcgcacaactaccacaaggggtgaa
cctccactgaaaaaacttcagaagaagtttacctcatatgctcttgagattgagaaagat
gcagacaacagcaatgattgtgaacggctagcaaaagccttcttacaggagcttacaact
tttgaactaccacttcttaagagcaaggctgttattgatgcaaatttaagagagaaggag
aattttaatgagctgaaggctgagataaataggcaaataatacaggcagaggatgatata
gaagacttgaagaaacaactagaagagagcaaggtggaaaggcagcacaaggaggagtgt
gagacaattaggaaattaattgctatgcagccaccaagatcagagacacaaaaagttctt
acggaccttgaaaaagaaattgctttgttggaggcagaaaatatatctggctcaaggacg
ctggagcttcggaagaaacagttcgctcttctattgcatgtggtggatgagttacagaac
accatagaggaagaaccgaggagtttgatggaggagatgagaaatgcaatggaagatcat
aagaatggaattgaggatgctagttgtggtccagatgcaatggctgttgactag
DBGET
integrated database retrieval system
